Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4576 |
Symbol | |
ID | 6269374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 4273822 |
End bp | 4274562 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641728355 |
Product | hypothetical protein |
Protein accession | YP_001882753 |
Protein GI | 187731632 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTCATC GTGCACGACA CCAATTACTG GCGTTGCCGG GCATTATCTT TTTAGTTCTC TTTCCCATCA TTCTTTCGCT ATGGATTGCC TTCCTTTGGG CAAAATCAGA AGTGAATAAT CAGCTCCGAA CCTTTGCTCA ACTGGCACTG GATAAATCCG AGCTGGTCAT TCGCCAGGCA GATTTAGTGA GCGATGCAGC TGAACGCTAT CAGGGGCAAG TTTGCACTCC AGCCCATCAA AAGCGAATGT TGAATATTAT TCGTGGCTAT CTTTATATTA ATGAATTGAT CTATGCCCGT GATAACCATT TTTTATGCTC ATCGCTGATA GCGCCTGTAA ACGGCTATAC GATTGCACCG GCCGATTATA AGCGTGAACC TAACGTTTCT ATCTATTATT ACCGCGATAC GCCTTTTTTC TCTGGCTATA AAATGACCTA TATGCAGCGG GGAAATTATG TGGCGGTTAT CAACCCTCTC TTCTGGAGTG AAGTGATGTC TGATGATCCG ACATTGCAAT GGGGTGTGTA TGATACGGTG ACGAAAACCT TTTTCTCGTT AAGCAAAGAG GCCTCGGCAG CAACGTTTTC TCCGCTGATT CATTTGAAGG ATTTAACCGT ACAAAGAAAT GGCTATTTAT ATGCGACAGT TTATTCGACA AAACGCCCAA TTGCAGCCAT TGTTGCGACT TCATATCAAC GTCTTATAAC CCATTTTTAT AATCATCTTA TTTTTGGGTA A
|
Protein sequence | MSHRARHQLL ALPGIIFLVL FPIILSLWIA FLWAKSEVNN QLRTFAQLAL DKSELVIRQA DLVSDAAERY QGQVCTPAHQ KRMLNIIRGY LYINELIYAR DNHFLCSSLI APVNGYTIAP ADYKREPNVS IYYYRDTPFF SGYKMTYMQR GNYVAVINPL FWSEVMSDDP TLQWGVYDTV TKTFFSLSKE ASAATFSPLI HLKDLTVQRN GYLYATVYST KRPIAAIVAT SYQRLITHFY NHLIFG
|
| |