Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4556 |
Symbol | plsB |
ID | 6270618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 4257849 |
End bp | 4260272 |
Gene Length | 2424 bp |
Protein Length | 807 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641728338 |
Product | glycerol-3-phosphate acyltransferase |
Protein accession | YP_001882736 |
Protein GI | 187730242 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2937] Glycerol-3-phosphate O-acyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGGCT GGCCACGAAT TTACTACAAA TTACTGAATT TACCATTAAG CATCCTGGTA AAAAGCAAGT CTATTCCGGC AGATCCTGCC CCGGAACTGG GGCTGGATAC CTCTCGTCCA ATTATGTACG TTTTACCGTA CAACTCGAAA GCAGATTTGC TGACGTTACG CGCCCAGTGT CTGGCTCATG ACTTGCCTGA CCCGTTAGAG CCGCTGGAAA TCGACGGCAT GCTACTGCCG CGCTATGTGT TCATTCACGG CGGGCCGCGT GTATTCACCT ATTACACGCC GAAAGAAGAG TCTATTAAGC TGTTCCACGA CTATCTCGAT TTGCACCGTA GCAACCCAAA TCTGGATGTG CAGATGGTGC CAGTATCGGT GATGTTTGGT CGCGCGCCGG GGCGTGAAAA AGGCGAAGTA AACCCGCCGC TGCGTATGCT TAACGGCGTA CAGAAATTTT TCGCCGTACT GTGGCTCGGT CGCGACAGTT TTGTGCGTTT CTCGCCGTCA GTTTCGCTGC GCCGTATGGC GGATGAACAC GGCACGGATA AAACTATCGC ACAGAAACTG GCGCGCGTGG CGCGTATGCA CTTTGCCCGT CAACGTCTGG CTGCTGTGGG CCCACGTCTG CCTGCTCGTC AGGATCTGTT TAATAAGCTG CTCGCCTCCC GCGCCATTGC CAAAGCGGTA GAAGATGAAG CGCACAGCAA AAAAATCTCC CATGAAAAAG CGCAGCAGAA CGCGATTGCG CTGATGGAAG AGATTGCGGC GAATTTCTCT TACGAGATGA TCCGCCTGAC TGACCGCATT CTGGGCTTCA CCTGGAACCG ACTTTATCAG GGCATCAACG TCCATAACGC CGAGCGCGTT CGCCAGCTGG CCCACGACGG TCATGAGCTG GTGTATGTGC CTTGCCACCG CAGTCACATG GACTACCTGC TACTTTCTTA CGTGCTGTAC CACCAGGGGC TCGTGCCGCC GCATATCGCC GCCGGGATCA ACCTGAATTT CTGGCCGGCC GGGCCGATTT TCCGCCGTCT GGGGGCGTTC TTTATTCGCC GTACGTTTAA AGGCAATAAA CTTTATTCCA CCGTTTTCCG TGAGTATCTC GGCGAACTGT TCAGCCGTGG TTATTCCGTC GAGTATTTCG TGGAAGGCGG TCGTTCCCGT ACGGGGCGTT TGCTGGATCC GAAAACCGGT ACGCTGTCGA TGACCATTCA GGCGATGCTG CGTGGCGGCA CGCGTCCGAT TACGCTGATT CCGATCTATA TCGGTTATGA GCACGTCATG GAAGTGGGGA CTTACGCCAA AGAACTGCGC GGTGCGACGA AAGAGAAAGA GAGCCTGCCG CAGATGCTGC GCGGTTTAAG CAAGCTGCGT AATCTCGGTC AGGGTTACGT CAACTTCGGT GAACCAATGC CGTTGATGAC CTACCTTAAC CAGCATGTAC CTGACTGGCG TGAATCTATC GATCCCATCG AAGCGGTGCG TCCGGCATGG TTAACGCCGA CGGTCAATAA TATTGCTGCC GATCTGATGG TACGCATTAA CAACGCAGGC GCGGCAAACG CCATGAACCT CTGCTGTACC GCGCTACTGG CATCACGTCA GCGCTCACTT ACCCGCGAGC AGTTAACCGA GCAACTCAAC TGCTACCTGG ATCTGATGCG CAACGTACCT TACTCCACGG ACTCTACCGT TCCTTCAGCC AGCGCCAGCG AGCTTATCGA TCACGCGCTG CAAATGAACA AGTTTGAAGT TGAGAAAGAC ACTATCGGCG ACATCATCAT TCTGCCGCGC GAGCAAGCGG TGCTGATGAC CTACTATCGC AACAACATTG CGCATATGTT GGTGCTGCCT TCGCTGATGG CGGCAATTGT CACCCAGCAT CGCCACATCT CCCGCGACGT ATTGATGGAG CACGTCAATG TGCTTTACCC AATGCTGAAA GCGGAGCTGT TCCTGCGCTG GGATCGCGAC GAGTTGCCGG ACGTTATTGA TGCGTTGGCA AATGAGATGC AACGTCAGGG GCTGATTACC CTGCAAGATG ATGAGTTGCA TATCAACCCG TCGCATTCTC GCACGCTACA GCTGCTGGCC GCAGGCGCGC GCGAAACGCT GCAACGTTAT GCCATCACCT TCTGGCTGTT GAGCGCTAAC CCGTCGATCA ACCGCGGTAC GCTGGAGAAA GAGAGCCGCA CCGTCGCGCA ACGTCTCTCC GTGCTGCACG GTATCAACGC GCCGGAGTTC TTCGACAAGG CGGTGTTCAG TTCTCTGGTG CTGACGCTGC GTGATGAAGG GTATATCAGC GATAGCGGCG ATGCCGAACC GGCAGAAACG ATGAAGGTTT ATCAGTTGCT GGCGGAGTTG ATTACATCAG ACGTGCGTTT GACGATTGAG AGTGCGACGC AGGGCGAAGG GTAA
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Protein sequence | MSGWPRIYYK LLNLPLSILV KSKSIPADPA PELGLDTSRP IMYVLPYNSK ADLLTLRAQC LAHDLPDPLE PLEIDGMLLP RYVFIHGGPR VFTYYTPKEE SIKLFHDYLD LHRSNPNLDV QMVPVSVMFG RAPGREKGEV NPPLRMLNGV QKFFAVLWLG RDSFVRFSPS VSLRRMADEH GTDKTIAQKL ARVARMHFAR QRLAAVGPRL PARQDLFNKL LASRAIAKAV EDEAHSKKIS HEKAQQNAIA LMEEIAANFS YEMIRLTDRI LGFTWNRLYQ GINVHNAERV RQLAHDGHEL VYVPCHRSHM DYLLLSYVLY HQGLVPPHIA AGINLNFWPA GPIFRRLGAF FIRRTFKGNK LYSTVFREYL GELFSRGYSV EYFVEGGRSR TGRLLDPKTG TLSMTIQAML RGGTRPITLI PIYIGYEHVM EVGTYAKELR GATKEKESLP QMLRGLSKLR NLGQGYVNFG EPMPLMTYLN QHVPDWRESI DPIEAVRPAW LTPTVNNIAA DLMVRINNAG AANAMNLCCT ALLASRQRSL TREQLTEQLN CYLDLMRNVP YSTDSTVPSA SASELIDHAL QMNKFEVEKD TIGDIIILPR EQAVLMTYYR NNIAHMLVLP SLMAAIVTQH RHISRDVLME HVNVLYPMLK AELFLRWDRD ELPDVIDALA NEMQRQGLIT LQDDELHINP SHSRTLQLLA AGARETLQRY AITFWLLSAN PSINRGTLEK ESRTVAQRLS VLHGINAPEF FDKAVFSSLV LTLRDEGYIS DSGDAEPAET MKVYQLLAEL ITSDVRLTIE SATQGEG
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