Gene SbBS512_E4546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4546 
SymboldusA 
ID6271798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp4250832 
End bp4251875 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content53% 
IMG OID641728329 
ProducttRNA-dihydrouridine synthase A 
Protein accessionYP_001882727 
Protein GI187731116 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID[TIGR00742] tRNA dihydrouridine synthase A 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAATGC ACGGTAATTC TGAAATGCAA AAAATCAACC AAACCAGCGC AATGCCTGAA 
AAAACTGACG TTCACTGGAG TGGTCGGTTT AGCGTTGCAC CAATGCTCGA CTGGACGGAC 
AGACATTGCC GCTATTTCTT GCGTCTGCTT TCCCGCAATA CGTTGCTGTA TACCGAAATG 
GTGACCACAG GGGCGATTAT TCACGGTAAA GGTGATTACC TGGCGTACAG TGAAGAAGAA 
CATCCGGTAG CGTTGCAACT CGGCGGTAGC GATCCGGCGG CGCTGGCACA GTGTGCGAAG 
CTGGCAGAAG CGCGTGGATA TGATGAGATC AACCTGAATG TCGGCTGCCC GTCTGACCGG 
GTGCAGAACG GCATGTTTGG TGCGTGTCTG ATGGGTAATG CGCAGCTGGT TGCCGATTGC 
GTGAAAGCGA TGCGCGATGT GGTGTCGATT CCGGTGACGG TGAAAACGCG TATTGGCATC 
GATGACCAGG ACAGCTATGA ATTTCTCTGC GATTTCATCA ACACCGTTTC CGGCAAAGGC 
GAGTGTGGGA TGTTCATCAT CCATGCACGT AAAGCCTGGC TTTCGGGGTT AAGCCCGAAA 
GAAAACCGTG AAATCCCGCC GCTCGATTAT CCGCGTGTGT ATCAACTGAA GCGTGACTTT 
CCGCATCTGA CAATGTCGAT TAACGGTGGT ATCAAGTCGC TGGAAGAGGC CAAAGCACAC 
CTGCAACATA TGGATGGCGT GATGGTCGGG CGCGAGGCGT ATCAGAATCC GGGTATTCTG 
GCGGCGGTAG ACCGGGAGAT CTTTGGTTCC TCGGATACCG ATGCCTATCC GGTGGCGGTA 
GTGCGCGCCA TGTATCCGTA CATTGAGCGT GAACTCAGCC AGGGGACGTA TCTCGGCCAT 
ATTACCCGGC ATATGTTGGG CTTGTTCCAG GGTATTCCTG GCGCGCGGCA GTGGCGGCGT 
TATTTAAGTG AAAATGCCCA TAAAGCGGGT GCAGACATTA ATGTGTTGGA ACACGCGCTC 
AAACTGGTGG CGGATAAGCG TTAA
 
Protein sequence
MKMHGNSEMQ KINQTSAMPE KTDVHWSGRF SVAPMLDWTD RHCRYFLRLL SRNTLLYTEM 
VTTGAIIHGK GDYLAYSEEE HPVALQLGGS DPAALAQCAK LAEARGYDEI NLNVGCPSDR 
VQNGMFGACL MGNAQLVADC VKAMRDVVSI PVTVKTRIGI DDQDSYEFLC DFINTVSGKG 
ECGMFIIHAR KAWLSGLSPK ENREIPPLDY PRVYQLKRDF PHLTMSINGG IKSLEEAKAH 
LQHMDGVMVG REAYQNPGIL AAVDREIFGS SDTDAYPVAV VRAMYPYIER ELSQGTYLGH 
ITRHMLGLFQ GIPGARQWRR YLSENAHKAG ADINVLEHAL KLVADKR