Gene SbBS512_E4544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4544 
Symbolqor 
ID6272116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp4249308 
End bp4250291 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content52% 
IMG OID641728327 
Productquinone oxidoreductase, NADPH-dependent 
Protein accessionYP_001882725 
Protein GI187730380 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAC GAATTAAATT TCACAAGCAC GGTGGCCCGG AAGTACTTCA AGCCGTAGAG 
TTCACTCCTG CCGATCCGGC AGAGAATGAA ATCCAGGTCG AAAATAAAGC CATCGGCATC
AATTTTATCG ACACGTATAT CCGCAGCGGC CTTTACCCGC CGCCATCACT ACCCAGCAGA
TCAGGTACCG AAGCGGCAGG CATCGTGAGT AAAGTCGGCA GTGGTGTAAA GCATATTAAG
GCAGGCGATC GTGTAGTCTA TGCGCAGTCG GCGTTAGGCG CTTACAGCTC TGTGCATAAC
ATTAATGCGG ATAAAGCGGC GATTCTGCCT GCGGCTATTT CTTTTGAGCA AGCTGCAGCA
TCTTTCCTGA AAGGCTTAAC GGTTTATTAT CTGCTGCGCA AAACCTATGA AATTAAACCC
GATGAACAGT TCCTGTTCCA CGCAGCGGCT GGCGGCGTTG GCTTGATTGC CTGCCAGTGG
GCAAAAGCTC TGGGCGCGAA ACTTATCGGC ACCGTAGGAA CCGCGCAAAA AGCGCAGAGC
GCGCTAAAAG CCGGCGCGTG GCAGGTTATT AACTATCGTG AAGAGAATCT GGTCGAGCGA
TTGAAAGAGA TCACCGGCGG TAAGAAAGTG CGCGTAGTGT ACGATTCCGT GGGCAGAGAC
ACCTGGGAAC GGTCGCTGGA TTGCCTGCAA CGCCGCGGCT TAATGGTCAG TTTTGGCAAC
TCATCAGGTG CGGTTACCGG TGTGAACTTA GGCATTCTCA ATCAAAAAGG CTCGTTGTAT
GTGACACGCC CTTCCCTGCA AGGCTATATC ACCACGCGGG AGGAATTAAC CGAGGCCAGT
AATGAACTGT TCTCTTTGAT TGCCAGCGGT GTGATTAAGG TCGATGTCGC CGAGCAGCAG
AAATATCCGC TGAAGGATGC GCAGCGTGCG CATGAGATTC TGGAAAGCCG GGCGACGCAA
GGTTCCAGCC TGCTGATTCC ATAA
 
Protein sequence
MATRIKFHKH GGPEVLQAVE FTPADPAENE IQVENKAIGI NFIDTYIRSG LYPPPSLPSR 
SGTEAAGIVS KVGSGVKHIK AGDRVVYAQS ALGAYSSVHN INADKAAILP AAISFEQAAA
SFLKGLTVYY LLRKTYEIKP DEQFLFHAAA GGVGLIACQW AKALGAKLIG TVGTAQKAQS
ALKAGAWQVI NYREENLVER LKEITGGKKV RVVYDSVGRD TWERSLDCLQ RRGLMVSFGN
SSGAVTGVNL GILNQKGSLY VTRPSLQGYI TTREELTEAS NELFSLIASG VIKVDVAEQQ
KYPLKDAQRA HEILESRATQ GSSLLIP