Gene SbBS512_E4534 details

Gene Information

• Locus tag: SbBS512_E4534
• ID: 6273294
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 4240347
• End bp: 4242443
• Gene Length: 2097 bp
• Protein Length: 698 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 641728317
• Product: putative lipoprotein
• Protein accession: YP_001882715
• Protein GI: 187731167

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA GACATCTGCT TAGCTTACTG GCGCTGGGCA TTAGCATGGC TTGCTACGGC 
GAAACATATC CTGCGCCCAT TGGCCCGTCG CAGTCGGATT TCGGTGGCGT AGGATTATTA 
CAAACGCCCA CCGCACGCAT GGCGCGGGAA GGGGAGTTGA GCCTGAACTA TCGCGATAAC 
GATCAGTACC GTTATTACTC AGCTTCAGTG CAACTCTTCC CGTGGCTGGA AACAACGCTG 
CGCTACACCG ACGTGCGCAC CCGGCAGTAC AGCAGCGTCG AAGCGTTCTC TGGCGATCAA 
ACGTATAAAG ATAAAGCCTT CGATCTCAAA CTGCGTTTGT GGGAAGAGAG TTACTGGCTG 
CCGCAAGTGG CGGTTGGTGC GAGGGATATC GGCGGTACGG GGCTGTTTGA TGCGGAATAT 
CTTGTTGCCA GCAAAGCCTG GGGGCCGTTC GATTTTACGC TCGGCCTGGG CTGGGGTTAT 
CTGGGCACCA GCGGTAATGT GAAAAATCCG CTCTGTTCAG CCAGTGATAA ATATTGCTAT 
CGCGATAACA GCTACAAACA GGCGGGATCT ATCGACGGTA GCCAGATGTT CCACGGTCCT 
GCCTCACTGT TTGGCGGCGT GGAATACCAG ACGCCCTGGC AACCGCTGCG CCTGAAACTG 
GAGTATGAAG GCAATAATTA TCAGCAGGAT TTTGCCGGGA AGCTGGAGCA AAAAAGTAAG 
TTTAACGTCG GTGCGATTTA TCGCGTTACC GATTGGGCCG ACGTTAACCT TAGCTATGAA 
CGTGGCAACA CCTTTATGTT TGGCGTCACG CTGCGCACCA ACTTTAACGA TCTGCGCCCG 
TCTTACAACG ATAACGCCCG CCCGCAATAT CAACCGCAGC CGCAGGATGC CATTTTGCAG 
CATTCGGTGG TGGCGAATCA GTTAACGCTG TTGAAATACA ATGCCGGACT TGCCGATCCG 
CAGATCCAGG CGAAAGGCGA TACGCTGTAT GTCACCGGCG AGCAGGTGAA ATATCGTGAT 
TCGCGCGAAG GGATCATCCG TGCTAATCGG ATCGTGATGA ACGATCTGCC GGATGGGATC 
AAAACGATCC GCATTACGGA AAATCGTCTT AACATGCCGC AGGTGACGAC GGAAACCGAT 
GTCGCCAGCC TGAAAAATCA TCTCGCCGGA GAGCCGTTGG GCCACGAAAC GAAGCTGGCG 
CAAAAACGCG TCGAGCCAGT GGTTCCGCAG TCCACCGAGC AGGGCTGGTA TATCGACAAA 
TCACGCTTTG ATTTCCATAT CGATCCGGTG CTGAACCAGT CGGTCGGTGG CCCGGAAAAC 
TTTTACATGT ATCAGCTGGG CGTGATAGGA ATGGCAGATT TGTGGCTGAC GGACCATCTG 
CTGACCACCG GCAGCCTGTT TGCAAATCTT GCCAACAACT ACGACAAGTT TAACTACACC 
AATCCGCCGC AGGACTCGCA CTTACCGCGC GTTCGTACCC ATGTGCGCGA GTATGTGCAG 
AACGATGTCT ATGTGAATAA CCTGCAAGCC AACTACTTCC AGCATCTGGG CAACGGCTTC 
TACGGTCAGG TCTATGGAGG TTATCTCGAA ACCATGTTTG GCGGTGCGGG GGCCGAAGTG 
TTGTATCGTC CGCTGGACAG TAACTGGGCG TTTGGTCTGG ATGCCAACTA CGTTAAACAG 
CGCGACTGGC GTAGTGCAAA AGATATGATG AAATTCACCG ACTACAGCGT GAAAACCGGA 
CATCTGACCG CCTACTGGAC GCCATCTTTC GCCCAGGACG TGTTGGTGAA AGCCAGCGTC 
GGGCAGTATC TGGCAGGGGA TAAAGGCGGC ACGCTGGAGA TCGCCAAACG CTTTGACAGC 
GGCGTGGTGG TGGGTGGCTA TGCCACGATC ACCAACGTTT TGAAAGAGGA GTACGGCGAA 
GGGGACTTCA CCAAAGGCGT GTATGTCTCG GTACCGTTGG ATCTCTTCTC GTCTGGCCCG 
ACACGCAGCC GTGCGGCGAT TGGCTGGACG CCGCTGACGC GTGACGGTGG TCAGCAACTT 
GGGCGTAAGT TCCAGTTGTA TGACATGACC AGCGACCGTA GCGTCAATTT CCGCTAA 

 

Protein sequence

MKKRHLLSLL ALGISMACYG ETYPAPIGPS QSDFGGVGLL QTPTARMARE GELSLNYRDN 
DQYRYYSASV QLFPWLETTL RYTDVRTRQY SSVEAFSGDQ TYKDKAFDLK LRLWEESYWL 
PQVAVGARDI GGTGLFDAEY LVASKAWGPF DFTLGLGWGY LGTSGNVKNP LCSASDKYCY 
RDNSYKQAGS IDGSQMFHGP ASLFGGVEYQ TPWQPLRLKL EYEGNNYQQD FAGKLEQKSK 
FNVGAIYRVT DWADVNLSYE RGNTFMFGVT LRTNFNDLRP SYNDNARPQY QPQPQDAILQ 
HSVVANQLTL LKYNAGLADP QIQAKGDTLY VTGEQVKYRD SREGIIRANR IVMNDLPDGI 
KTIRITENRL NMPQVTTETD VASLKNHLAG EPLGHETKLA QKRVEPVVPQ STEQGWYIDK 
SRFDFHIDPV LNQSVGGPEN FYMYQLGVIG MADLWLTDHL LTTGSLFANL ANNYDKFNYT 
NPPQDSHLPR VRTHVREYVQ NDVYVNNLQA NYFQHLGNGF YGQVYGGYLE TMFGGAGAEV 
LYRPLDSNWA FGLDANYVKQ RDWRSAKDMM KFTDYSVKTG HLTAYWTPSF AQDVLVKASV 
GQYLAGDKGG TLEIAKRFDS GVVVGGYATI TNVLKEEYGE GDFTKGVYVS VPLDLFSSGP 
TRSRAAIGWT PLTRDGGQQL GRKFQLYDMT SDRSVNFR