Gene SbBS512_E4515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4515 
SymbolpepE 
ID6268408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp4224418 
End bp4225107 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content55% 
IMG OID641728304 
Productpeptidase E 
Protein accessionYP_001882702 
Protein GI187732226 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3340] Peptidase E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTGC TTTTATTGAG TAACTCGACG CTGCCGGGTA AAGCCTGGCT GGAACATGCA 
CTGCCGCTAA TTGCTGAACA GTTGCAGGGT CGCCGCTCAG CGGTGTTTAT CCCTTTCGCT 
GGCGTAACGC AGACCTGGGA TGATTACACA GCGAAAACGG CTGCGGTTCT CGCTCCGCTG 
GGTGTTTCTG TCACCGGTAT TCATAGCGTT GTCGATCCCG TTGCCGCGAT TGAAAATGCT 
GAGATCGTGA TTGTCGGCGG CGGGAATACT TTCCAGTTGC TGAAACAGTG CCGCGAGCGC 
GGGCTGCTGG CACCAATTAC TGACGTGGTT AAACGTGGTG CGCTGTATAT TGGCTGGAGC 
GCAGGCGCTA ACCTTGCTTG CCCAACCATT CGTACCACCA ACGATATGCC GATTGTCGAT 
CCGCAAGGTT TCGATGCGCT AAATCTGTTC CCGTTGCAAA TCAACCCGCA CTTCACCAAC 
GCGCTGCCGG AAGGCCATAA AGGTGAAACC CGTGAGCAGC GTATTCGCGA ACTGCTGGTC 
GTCGCGCCAG AACTGACGAT TATTGGTCTA CCGGAAGGTA ACTGGATCAC AGTGAGTAAA 
GGTCACGCTA CGCTGGGTGG CCCGAACACC ACCTATGTGT TTAAGGCCGG TGAAGAAGCG 
GTTCCGCTGG AAGCTGGTCA CCGTTTTTAA
 
Protein sequence
MELLLLSNST LPGKAWLEHA LPLIAEQLQG RRSAVFIPFA GVTQTWDDYT AKTAAVLAPL 
GVSVTGIHSV VDPVAAIENA EIVIVGGGNT FQLLKQCRER GLLAPITDVV KRGALYIGWS 
AGANLACPTI RTTNDMPIVD PQGFDALNLF PLQINPHFTN ALPEGHKGET REQRIRELLV 
VAPELTIIGL PEGNWITVSK GHATLGGPNT TYVFKAGEEA VPLEAGHRF