Gene SbBS512_E4488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4488 
SymbolhemE 
ID6269878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp4198573 
End bp4199637 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content56% 
IMG OID641728281 
Producturoporphyrinogen decarboxylase 
Protein accessionYP_001882683 
Protein GI187733317 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID[TIGR01464] uroporphyrinogen decarboxylase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.830156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAC TTAAAAACGA TCGTTATCTG CGGGCGCTGC TGCGCCAGCC CGTTGATGTC 
ACTCCAGTAT GGATGATGCG CCAGGCGGGT CGCTATCTAC CGGAATATAA AGCCACGCGC
GCCCAGGCGG GCGATTTTAT GTCGCTGTGC AAAAACGCCG AGCTGGCGTG CGAAGTGACT
TTGCAACCGC TGCGTCGCTA CCCGCTGGAT GCGGCGATCC TCTTTTCCGA TATCCTCACC
GTGCCGGACG CGATGGGGTT AGGGCTCTAT TTTGAAGCCG GAGAAGGTCC GCGTTTTACC
TCGCCAGTCA CCTGCAAAGC CGACGTCGAT AAGCTGCCAA TTCCGGACCC GGAAGATGAG
CTGGGTTACG TGATGAACGC GGTGCGTACC ATTCGTCGCG AACTGAAAGG CGAAGTGCCG
CTGATTGGTT TTTCCGGCAG CCCGTGGACG CTGGCAACCT ACATGGTGGA AGGCGGCAGC
AGCAAAGCCT TCACCGTGAT CAAAAAAATG ATGTATGCCG ATCCGCAGGC GCTGCACGCT
CTACTCGATA AACTGGCGAA AAGCGTCACT TTGTATCTGA ATGCGCAGAT TAAAGCCGGT
GCTCAGGCAG TGATGATTTT CGACACCTGG GGCGGTGTGC TTACCGGGCG CGATTATCAA
CAGTTCTCGC TCTATTACAT GCATAAAATT GTTGATGGTT TACTGCGTGA AAACGACGGT
CGCCGCGTAC CGGTCACGCT GTTTACCAAA GGCGGCGGAC AGTGGCTGGA AGCGATGGCA
GAAACCGGTT GCGATGCGTT GGGCCTCGAC TGGACAACGG ATATCGCCGA TGCGCGCCGC
CGTGTGGGCA ATAAAGTCGC GTTGCAGGGT AATATGGATC CGTCGATGCT GTACGCGCCG
CCTGCCCGCA TTGAAGAAGA AGTAGCGACT ATACTTGCAG GTTTCGGTCA CGGCGAAGGT
CATGTCTTTA ACCTTGGTCA CGGCATTCAT CAGGATGTGC CGCCAGAACA TGCTGGCGTG
TTCGTGGAGG CAGTGCATCG ACTGTCTGAA CAATATCACC GCTAA
 
Protein sequence
MTELKNDRYL RALLRQPVDV TPVWMMRQAG RYLPEYKATR AQAGDFMSLC KNAELACEVT 
LQPLRRYPLD AAILFSDILT VPDAMGLGLY FEAGEGPRFT SPVTCKADVD KLPIPDPEDE
LGYVMNAVRT IRRELKGEVP LIGFSGSPWT LATYMVEGGS SKAFTVIKKM MYADPQALHA
LLDKLAKSVT LYLNAQIKAG AQAVMIFDTW GGVLTGRDYQ QFSLYYMHKI VDGLLRENDG
RRVPVTLFTK GGGQWLEAMA ETGCDALGLD WTTDIADARR RVGNKVALQG NMDPSMLYAP
PARIEEEVAT ILAGFGHGEG HVFNLGHGIH QDVPPEHAGV FVEAVHRLSE QYHR