Gene SbBS512_E4484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4484 
SymbolthiE 
ID6271707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp4194425 
End bp4195060 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content58% 
IMG OID641728277 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_001882679 
Protein GI187730775 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCAGC CTGATTTTCC TCCTGTACCT TTTCGTTTAG GACTGTACCC AGTGGTGGAC 
AGCGTACAGT GGATCGAACG TCTGTTGGAT GCAGGCGTAC GTACTCTCCA GCTACGCATC 
AAAGATCGGC GCGATGAAGA GGTGGAAGCC GATGTCGTGG CGGCAATTGC GCTGGGCCGC 
CGCTATAACG CGCGATTGTT TATCAACGAT TACTGGCGGC TCGCGATCAA GCATCAGGCG 
TATGGCGTCC ATTTGGGGCA GGAAGATTTG CAAGCCACCG ATCTCAATGC CATCCGCGCG 
GCAGGCCTGC GGCTGGGTGT TTCGACACAT GACGATATGG AAATCGACGT CGCGCTGGCA 
GCACGCCCCT CTTATATCGC GCTGGGACAT GTGTTCCCGA CGCAAACCAA ACAGATGCCT 
TCTGCACCGC AGGGGCTGGA ACAGCTGGCA CGGCATGTTG AGCGACTGGC GGATTATCCC 
ACCGTGGCGA TTGGCGGTAT CAGTCTGGCA CGCGCGCCTG CGGTGATAGC AACGGGTGTC 
GGCAGTATCG CCGTCGTCAG CGCCATTACT CAAGCCGCAG ACTGGCGTTT GGCAACGGCA 
CAGTTGCTGG AAATTGCAGG AGTTGGCGAT GAATGA
 
Protein sequence
MYQPDFPPVP FRLGLYPVVD SVQWIERLLD AGVRTLQLRI KDRRDEEVEA DVVAAIALGR 
RYNARLFIND YWRLAIKHQA YGVHLGQEDL QATDLNAIRA AGLRLGVSTH DDMEIDVALA 
ARPSYIALGH VFPTQTKQMP SAPQGLEQLA RHVERLADYP TVAIGGISLA RAPAVIATGV 
GSIAVVSAIT QAADWRLATA QLLEIAGVGD E