Gene SbBS512_E4480 details

Gene Information

• Locus tag: SbBS512_E4480
• Symbol: thiH
• ID: 6270122
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 4191591
• End bp: 4192724
• Gene Length: 1134 bp
• Protein Length: 377 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641728274
• Product: thiamine biosynthesis protein ThiH
• Protein accession: YP_001882676
• Protein GI: 187733267
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
• TIGRFAM ID: [TIGR02351] thiazole biosynthesis protein ThiH

Plasmid Coverage information

• Num covering plasmid clones: 49
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACCT TCAGCGATCG CTGGCGACAA CTGGACTGGG ATGACATCCG CCTGCGTATC 
AACGGCAAAA CGGCTGTTGA CGTAGAGCGG GCGCTAAATG CCTCGCAATT CACCCGCGAC 
GATATGATGG CGCTGTTATC GCCAGCCGCC AGTGGCTATC TGGAACAACT GGCCCAACGG 
GCGCAGCGTC TGACCCGTCA GCGATTTGGC AACGCAGTTA GTTTCTACGT CCCGCTTTAT 
CTTTCCAATC TTTGCGCTAA CGACTGCACG TACTGCGGAT TTTCCATGAG TAATCGCATC 
AAGCGCAAAA CGCTGGATGA AGCGGATATT GCCAGGGAAA GCGCCGCTAT ACGGGAGATG 
GGCTTTGAAC ATCTGCTATT AGTCACTGGT GAACATCAGG CGAAAGTGGG GATGGATTAC 
TTTCGTCGTC ATCTCCCCGC CCTGCGTGAA CAGTTCTCTT CACTACAAAT GGAAGTGCAA 
CCGCTGGCGA AGACGGAATA CGCCGAGTTA AAGCAGCTTG GTCTGGATGG CGTGATGGTT 
TATCAGGAGA CATATCACGA GGCGACTTAT GCCCGCCATC ATCTGAAAGG CAAAAAACAG 
GACTTCTTCT GGCGGCTGGA AACGCCGGAT CGGCTGGGGC GTGCGGGGAT TGATAAGATA 
GGCCTCGGCG CGCTAATTGG CCTTTCCGAC AACTGGCGCG TTGACTGCTA TATGGTTGCC 
GAACATTTGC TATGGCTGCA ACAGCATTAC TGGCAAAGCC GTTACTCTGT CTCTTTTCCG 
CGCCTGCGCC CGTGTACTGG CGGCATTGAG CCTGCGTCGA TTATGGATGA ACGCCAGTTA 
GTGCAAACCA TCTGCGCCTT CCGACTGCTT GCACCGGAGA TTGAACTGTC ACTCTCCACG 
CGGGAATCAC CGTGGTTTCG CGATCGCGTT ATTCCGCTGG CGATCAATAA CGTCAGCGCC 
TTCTCGAAAA CGCAGCCAGG TGGCTATGCC GATAATCACC CCGAGTTGGA ACAGTTCTCA 
CCGCACGACG ATCGCAGACC GGAAGCGGTT GCTGCCGCGT TAACCGCTCA GGGTTTGCAG 
CCGGTATGGA AAGACTGGGA CAGCTATCTG GGACGGGCCT CGCAAAGACT ATGA 

 

Protein sequence

MKTFSDRWRQ LDWDDIRLRI NGKTAVDVER ALNASQFTRD DMMALLSPAA SGYLEQLAQR 
AQRLTRQRFG NAVSFYVPLY LSNLCANDCT YCGFSMSNRI KRKTLDEADI ARESAAIREM 
GFEHLLLVTG EHQAKVGMDY FRRHLPALRE QFSSLQMEVQ PLAKTEYAEL KQLGLDGVMV 
YQETYHEATY ARHHLKGKKQ DFFWRLETPD RLGRAGIDKI GLGALIGLSD NWRVDCYMVA 
EHLLWLQQHY WQSRYSVSFP RLRPCTGGIE PASIMDERQL VQTICAFRLL APEIELSLST 
RESPWFRDRV IPLAINNVSA FSKTQPGGYA DNHPELEQFS PHDDRRPEAV AAALTAQGLQ 
PVWKDWDSYL GRASQRL