Gene SbBS512_E4473 details

Gene Information

• Locus tag: SbBS512_E4473
• Symbol: rplJ
• ID: 6270683
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 4180075
• End bp: 4180572
• Gene Length: 498 bp
• Protein Length: 165 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641728266
• Product: 50S ribosomal protein L10
• Protein accession: YP_001882670
• Protein GI: 187734099
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0244] Ribosomal protein L10

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0000000239877
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTTAA ATCTTCAAGA CAAACAAGCG ATTGTTGCTG AAGTCAGCGA AGTAGCCAAA 
GGCGCGCTGT CTGCAGTAGT TGCGGATTCC CGTGGCGTAA CTGTAGATAA AATGACTGAA 
CTGCGTAAAG CAGGTCGCGA AGCTGGCGTA TACATGCGTG TTGTTCGTAA CACCCTGCTG 
CGCCGTGCTG TTGAAGGTAC TCCGTTCGAG TGCCTGAAAG ACGCGTTTGT TGGTCCGACC 
CTGATTGCAT ACTCTATGGA ACACCCGGGC GCTGCTGCTC GTCTGTTCAA AGAGTTCGCG 
AAAGCGAATG CAAAATTTGA GGTCAAAGCC GCTGCCTTTG AAGGTGAGCT GATCCCGGCG 
TCTCAGATCG ACCGCCTGGC AACTCTGCCG ACCTACGAAG AAGCAATTGC ACGCCTGATG 
GCAACCATGA AAGAAGCTTC GGCTGGCAAA CTGGTTCGTA CTCTGGCTGC TGTACGCGAT 
GCGAAAGAAG CTGCTTAA 

 

Protein sequence

MALNLQDKQA IVAEVSEVAK GALSAVVADS RGVTVDKMTE LRKAGREAGV YMRVVRNTLL 
RRAVEGTPFE CLKDAFVGPT LIAYSMEHPG AAARLFKEFA KANAKFEVKA AAFEGELIPA 
SQIDRLATLP TYEEAIARLM ATMKEASAGK LVRTLAAVRD AKEAA