Gene SbBS512_E4449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4449 
SymbolfabR 
ID6268402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp4161461 
End bp4162108 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content53% 
IMG OID641728245 
ProductDNA-binding transcriptional repressor FabR 
Protein accessionYP_001882657 
Protein GI187733100 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.563556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCATAA GAGCGCAACA AAAAGAAAAA ACCCGCCGTT CGCTGGTGGA AGCCGCATTT 
AGCCAATTAA GTGCTGAACG CAGCTTCGCC AGCCTGAGTT TGCGTGAAGT GGCGCGTGAA 
GCGGGCATTG CTCCCACCTC TTTTTATCGG CATTTCCGCG ACGTAGACGA ACTGGGTCTG 
ACCATGGTTG ATGAGAGCGG TTTAATGCTA CGCCAACTCA TGCGCCAGGC GCGTCAGCGT 
ATCGCCAAAG GCGGGAGTGT GATCCGCACC TCGGTCTCCA CATTTATGGA GTTCATCGGT 
AATAATCCTA ACGCCTTCCG GTTATTATTG CGGGAACGCT CCGGCACCTC CGCTGCGTTT 
CGTGCCGCCG TTGCGCGTGA AATTCAGCAC TTCATTGCGG AACTTGCGGA CTATCTGGAA 
CTCGAAAACC ATATGCCGCG TGCGTTTACT GAAGCGCAAG CCGAAGCAAT GGTGACAATT 
GTCTTCAGTG CGGGTGCCGA GGCGTTGGAC GTCGGCGTCG AACAACGTCG GCAATTAGAA 
GAGCGACTGG TACTGCAACT GCGAATGATT TCGAAAGGGG CTTATTACTG GTATCGCCGT 
GAACAAGAGA AAACCGCAAT TATTCCGGGA AATGTGAAGG ACGAGTAA
 
Protein sequence
MGIRAQQKEK TRRSLVEAAF SQLSAERSFA SLSLREVARE AGIAPTSFYR HFRDVDELGL 
TMVDESGLML RQLMRQARQR IAKGGSVIRT SVSTFMEFIG NNPNAFRLLL RERSGTSAAF 
RAAVAREIQH FIAELADYLE LENHMPRAFT EAQAEAMVTI VFSAGAEALD VGVEQRRQLE 
ERLVLQLRMI SKGAYYWYRR EQEKTAIIPG NVKDE