| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4442 |
|---|
| Symbol | ppc |
|---|
| ID | 6273073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 4151040 |
|---|
| End bp | 4153691 |
|---|
| Gene Length | 2652 bp |
|---|
| Protein Length | 883 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641728237 |
|---|
| Product | phosphoenolpyruvate carboxylase |
|---|
| Protein accession | YP_001882650 |
|---|
| Protein GI | 187733328 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAC AATATTCCGC ATTGCGTAGT AATGTCAGTA TGCTCGGCAA AGTGCTGGGA
GAAACCATCA AGGATGCGTT GGGAGAACAC ATTCTTGAAC GCGTAGAAAC TATCCGTAAG
TTGTCCAAAT CTTCACGCGC TGGCAATGAT GCTAACCGCC AGGAGTTACT CACCACCTTA
CAAAATTTGT CGAACGACGA GCTGCTGCCC GTTGCGCGTG CGTTTAGTCA GTTCCTGAAC
CTAGCCAACA CCGCCGAGCA ATACCACAGC ATTTCGCCGA AAGGCGAAGC TGCCAGCAAC
CCGGAAGTGA TCGCCCGCAC CCTGCGTAAA CTGAAAAACC AGCCGGAACT GAGCGAAGAC
ACCATCAAAA AAGCAGTGGA ATCGCTGTCG CTGGAACTGG TCCTCACGGC TCACCCTACC
GAAATTACCC GTCGTACACT GATCCACAAA ATGGTGGAAG TGAACGCCTG CTTAAAACAG
CTCGATAACA AAGATATCGC TGACTACGAA CACAACCAGC TGATGCGTCG CCTGCGCCAG
TTAATCGCCC AGTCATGGCA TACCGATGAA ATCCGTAAGC TGCGTCCAAG CCCGGTAGAT
GAAGCCAAAT GGGGCTTTGC CGTAGTGGAA AACAGCCTGT GGCAAGGCGT ACCAAATTAC
CTGCGCGAAC TGAACGAACA ACTGGAAGAG AACCTCGGCT ACAAACTGCC CGTCGAATTT
GTTCCGGTCC GTTTTACTTC GTGGATGGGC GGCGACCGCG ACGGCAACCC GAACGTCACT
GCCGATATCA CCCGCCACGT CCTGCTACTC AGCCGCTGGA AAGCCACCGA TTTGTTCCTG
AAAGATATTC AGGTGCTGGT TTCTGAACTG TCGATGGTTG AAGCGACCCC TGAACTGCTG
GCGCTGGTTG GCGAAGAAGG TGCCGCAGAA CCGTATCGCT ATCTGATGAA AAACCTGCGT
TCTCGCCTGA TGGCGACACA GGCATGGCTG GAAGCGCGCC TGAAAGGCGA AGAACTGCCA
AAACCAGAAG GCCTGCTGAC ACAAAACGAA GAACTGTGGG AACCGCTCTA CGCTTGCTAC
CAGTCACTTC AGGCGTGTGG CATGGGTATT ATCGCCAACG GCGATCTGCT CGACACCCTG
CGCCGCGTGA AATGTTTCGG CGTACCGCTG GTCCGTATTG ATATCCGTCA GGAGAGCACC
CGCCATACCG AAGCGCTGGG CGAGCTGACC CGCTACCTCG GTATCGGCGA CTACGAAAGC
TGGTCAGAGG CCGACAAACA GGCGTTCCTG ATCCGCGAAC TGAACTCCAA ACGTCCGCTT
CTGCCGCGCA ACTGGCAACC AAGCGCCGAA ACGCGCGAAG TGCTCGATAC CTGCCAGGTG
ATTGCCGAAG CGCCGCAAGG CTCCATTGCC GCCTACGTGA TCTCGATGGC GAAAACGCCG
TCCGACGTAC TGGCTGTCCA CCTGCTGCTG AAAGAAGCGG GTATCGGGTT TGCGATGCCG
GTTGCTCCGC TGTTTGAAAC CCTCGATGAC CTGAACAACG CCAACGATGT CATGACCCAG
CTGCTCAATA TCGACTGGTA TCGCGGCCTG ATTCAGGGCA AACAGATGGT GATGATTGGC
TATTCCGACT CAGCAAAAGA TGCGGGCGTG ATGGCAGCGT CCTGGGCGCA ATATCAGGCA
CAGGATGCAT TAATCAAAAC CTGCGAAAAA GCGGGTATTG AGCTGACGTT GTTCCACGGT
CGCGGCGGTT CCATTGGTCG CGGCGGCGCA CCTGCCCATG CGGCACTGCT GTCACAACCG
CCAGGAAGCC TGAAAGGCGG CCTGCGCGTA ACCGAACAGG GCGAGATGAT CCGCTTTAAA
TATGGTCTGC CAGAAATCAC CGTCAGCAGC CTGTCGCTTT ATACCGGGGC GATTCTGGAA
GCCAACCTGC TGCCACCGCC GGAGCCGAAA GAGAGCTGGC GTCGCATTAT GGATGAACTG
TCAGTCATCT CCTGCGATGT CTACCGCGGC TACGTACGTG AAAACAAAGA TTTTGTGCCT
TACTTCCGCT CCGCTACGCC GGAACAAGAA CTGGGCAAAC TGCCGTTGGG TTCACGTCCG
GCGAAACGTC GCCCAACCGG CGGCGTCGAG TCACTACGTG CCATTCCGTG GATCTTCGCC
TGGACGCAAA ACCGTCTGAT GCTCCCCGCC TGGCTGGGTG CAGGTACGGC GCTGCAAAAA
GTGGTCGAAG ACGGCAAACA GAGCGAGCTG GAGGCTATGT GCCGCGATTG GCCATTCTTC
TCGACGCGTC TCGGCATGCT GGAGATGGTC TTCGCCAAAG CAGACCTGTG GCTGGCGGAA
TACTATGATC AACGCCTGGT AGACAAAGCA CTGTGGCCGT TAGGTAAAGA GTTACGCAAT
CTGCAAGAAG AAGACATCAA AGTGGTGCTG GCGATTGCCA ACGATTCCCA TCTGATGGCC
GATCTGCCGT GGATTGCAGA GTCTATTCAG CTACGGAATA TTTACACCGA CCCGCTGAAC
GTATTGCAGG CCGAGTTGCT GCACCGCTCC CGCCAGGCAG AAAAAGAAGG CCAGGAACCG
GATCCTCGCG TCGAACAAGC GTTAATGGTC ACTATTGCCG GGATTGCGGC AGGTATGCGT
AATACCGGCT AA
|
|---|
| Protein sequence | MNEQYSALRS NVSMLGKVLG ETIKDALGEH ILERVETIRK LSKSSRAGND ANRQELLTTL
QNLSNDELLP VARAFSQFLN LANTAEQYHS ISPKGEAASN PEVIARTLRK LKNQPELSED
TIKKAVESLS LELVLTAHPT EITRRTLIHK MVEVNACLKQ LDNKDIADYE HNQLMRRLRQ
LIAQSWHTDE IRKLRPSPVD EAKWGFAVVE NSLWQGVPNY LRELNEQLEE NLGYKLPVEF
VPVRFTSWMG GDRDGNPNVT ADITRHVLLL SRWKATDLFL KDIQVLVSEL SMVEATPELL
ALVGEEGAAE PYRYLMKNLR SRLMATQAWL EARLKGEELP KPEGLLTQNE ELWEPLYACY
QSLQACGMGI IANGDLLDTL RRVKCFGVPL VRIDIRQEST RHTEALGELT RYLGIGDYES
WSEADKQAFL IRELNSKRPL LPRNWQPSAE TREVLDTCQV IAEAPQGSIA AYVISMAKTP
SDVLAVHLLL KEAGIGFAMP VAPLFETLDD LNNANDVMTQ LLNIDWYRGL IQGKQMVMIG
YSDSAKDAGV MAASWAQYQA QDALIKTCEK AGIELTLFHG RGGSIGRGGA PAHAALLSQP
PGSLKGGLRV TEQGEMIRFK YGLPEITVSS LSLYTGAILE ANLLPPPEPK ESWRRIMDEL
SVISCDVYRG YVRENKDFVP YFRSATPEQE LGKLPLGSRP AKRRPTGGVE SLRAIPWIFA
WTQNRLMLPA WLGAGTALQK VVEDGKQSEL EAMCRDWPFF STRLGMLEMV FAKADLWLAE
YYDQRLVDKA LWPLGKELRN LQEEDIKVVL AIANDSHLMA DLPWIAESIQ LRNIYTDPLN
VLQAELLHRS RQAEKEGQEP DPRVEQALMV TIAGIAAGMR NTG
|
|---|
| |