| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4434 |
|---|
| Symbol | ptsA |
|---|
| ID | 6272385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 4140312 |
|---|
| End bp | 4142813 |
|---|
| Gene Length | 2502 bp |
|---|
| Protein Length | 833 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641728231 |
|---|
| Product | multi-phosphoryl transfer protein 2 |
|---|
| Protein accession | YP_001882644 |
|---|
| Protein GI | 187732705 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)
[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
|---|
| TIGRFAM ID | [TIGR00848] PTS system, fructose subfamily, IIA component
[TIGR01003] Phosphotransferase System HPr (HPr) Family
[TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTGA TTGTGGAATT TATTTGTGAG CTACCTAACG GCGTACATGC GCGTCCGGCA
AGCCACGTTG AAACGCTGTG TAATACTTTT TCATCACAAA TTGAGTGGCA TAACCTGCGC
ACTGACCGCA AGGGCAACGC CAAAAGCGCC CTTGCGCTGA TTGGCACCGA TACGCTGGCG
GGCGATAACT GCCAGTTACT GATTTCCGGG GCCGACGAAC AGGAAGCGCA CCAGCGTTTA
AGCCAATGGC TGCGCGATGA ATTCCCCCAC TGCGATGCGC CGCTGGCGGA AGTTAAATCT
GACGAACTGG AACCACTGCC GGTTTCACTG ACCAATCTGA ATCCGCAAAT TATCCGCGCC
CGCACCGTGT GCAGCGGTAG TGCAGGCGGC ATTCTGACGC CGATCTCTTC TTTAGATCTC
AATGCGCTGA GTAATCTTCC CGCAGCCAAA GACGTTGACG CCGAGCAATC CGCACTGGAA
AATGGCCTGA CGCTGGTACT GAAAAACATT GAGTTTCGTC TGCTGGATAG CGACGGTGCT
ACCAGCGCGA TACTGGAAGC TCACCGATCC CTGGCTGGCG ATACATCTTT ACGTCAGCAC
TTACTGGCAG GCGTCAGCGA GGGATTAAGC TGTGCCGAAG CGATTGTCGC CAGTGCGAAT
CACTTTTGCG AAGAGTTCGC CCGTTCCAGC AGCAGCTACC TGCAAGAACG TGCCCTGGAC
GTACGCGACG TCTGCTTCCA GTTACTCCAG CAAATCTACG GTGAGCAACG CTTCCCGGCA
CCGGGCAAAC TGACGCAGCC CGCCATTTGT ATGGCTGATG AACTGACTCC CAGCCAGTTC
CTCGAACTGG ATAAAAATCA CCTCAAAGGT CTGTTACTGA AAAGTGGCGG CACCACCTCA
CATACCGTAA TTCTTGCCCG TTCGTTCAAC ATTCCGACAC TGGTTGGTGT AGATATTGAT
GCCCTTACTC CGTGGCAGCA TCAAACGATT TATATCGACG GCAACGCCGG GGCGATTGTG
GTTGAGCCAG GGGAAGCCGT GGCCCGTTAT TATCAGCAAG AAGCCCGCGT ACAGGACGCC
CTTCGTGAGC AACAGCGTGT CTGGCTGACC CAACAAGCCC GTACCGCTGA CGGTATCCGC
ATTGAAATTG CCGCTAACAT CGCTCACTCC GTGGAAGCGC AGGCCGCATT CGGCAATGGT
GCGGAAGGCG TTGGTTTGTT CCGCACTGAA ATGCTCTATA TGGATCGCAC CAGTGCACCG
GGCGAAAGCG AGCTGTACAA CATTTTTTGT CAGGCGCTGG AGTCTGCCAA CGGACGCAGC
ATTATTGTGC GCACTATGGA CATTGGCGGC GACAAACCCG TTGATTATCT GAACATTCCG
GCAGAAGCTA ACCCGTTCCT CGGTTATCGC GCTGTGCGTA TTTATGAAGA ATACGCCTCG
CTGTTCACCA CACAACTACA GTCGATCCTG CGCGCCTCCG CTCACGGCAG CCTGAAAATC
ATGATCCCGA TGATCTCCTC AATGGAAGAG ATCTTATGGG TGAAAGAAAA ACTGGCGGAA
GCCAAACAGC AACTGCGTAA CGAACACATT CCGTTTGATG AGAAGATCCA GCTTGGCATT
ATGCTGGAAG TACCGTCGGT GATGTTCATC ATCGATCAAT GCTGCGAAGA GATTGATTTC
TTTAATATTG GTAGTAATGA CCTGACGCAA TATCTGCTGG CAGTGGATCG CGATAACGCT
AAGGTTACTC GTCACTACAA CAGCCTGAAT CCGGCATTCT TGCGGGCGCT CGATTACGCC
GTGCAGGCGG TGCATCGCCA GGGCAAATGG ATTGGTCTGT GCGGTGAGCT GGGAGCGAAA
GGTTCCGTGC TGCCGTTGCT GGTCGGCTTA GGGCTGGATG AACTCAGCAT GAGCGCACCA
TCAATTCCGG CGGCGAAAGC GCGGATGGCG CAACTTGATA GCCTTGAGTG CCGCAAGTTG
CTCAACCAGG CAATGGCCTG CCGTACTTCG CTGGAAGTGG AACACCTGCT GGCGCAATTC
CGCATGACCC AACAGGACGC ACCGCTGGTC ACCGCCGAGT GCATCACGCT GGAAAGTGAC
TGGCGCAGCA AAGAAGAAGT GCTCAAAGGC ATGACCGATA ACCTGCTGCT GGCGGGCCGC
TGCCGCTATC CGCGTAAACT GGAAGCCGAC TTATGGGCGC GCGAGGCCGT TTTCTCTACC
GGTCTGGGCT TTAGTTTTGC CATTCCACAC AGCAAATCAG AACACATTGA GCAATCCACC
ATCAGCGTGG CGCGTCTGCA AGCGCCGGTG CGCTGGGGCG ATGATGAAGC GCAATTCATC
ATTATGTTAA CCCTGAACAA ACACGCTGCG GGCGATCAGC ACATGCGCAT TTTCTCGCGC
CTCGCTCGCC GCATCATGCA CGAAGAATTC CGTAACGCGC TGGTTAACGC CGCCTCTGCC
GACGCTATCG CCAGCCTGCT GCAACATGAA CTGGAACTGT AA
|
|---|
| Protein sequence | MALIVEFICE LPNGVHARPA SHVETLCNTF SSQIEWHNLR TDRKGNAKSA LALIGTDTLA
GDNCQLLISG ADEQEAHQRL SQWLRDEFPH CDAPLAEVKS DELEPLPVSL TNLNPQIIRA
RTVCSGSAGG ILTPISSLDL NALSNLPAAK DVDAEQSALE NGLTLVLKNI EFRLLDSDGA
TSAILEAHRS LAGDTSLRQH LLAGVSEGLS CAEAIVASAN HFCEEFARSS SSYLQERALD
VRDVCFQLLQ QIYGEQRFPA PGKLTQPAIC MADELTPSQF LELDKNHLKG LLLKSGGTTS
HTVILARSFN IPTLVGVDID ALTPWQHQTI YIDGNAGAIV VEPGEAVARY YQQEARVQDA
LREQQRVWLT QQARTADGIR IEIAANIAHS VEAQAAFGNG AEGVGLFRTE MLYMDRTSAP
GESELYNIFC QALESANGRS IIVRTMDIGG DKPVDYLNIP AEANPFLGYR AVRIYEEYAS
LFTTQLQSIL RASAHGSLKI MIPMISSMEE ILWVKEKLAE AKQQLRNEHI PFDEKIQLGI
MLEVPSVMFI IDQCCEEIDF FNIGSNDLTQ YLLAVDRDNA KVTRHYNSLN PAFLRALDYA
VQAVHRQGKW IGLCGELGAK GSVLPLLVGL GLDELSMSAP SIPAAKARMA QLDSLECRKL
LNQAMACRTS LEVEHLLAQF RMTQQDAPLV TAECITLESD WRSKEEVLKG MTDNLLLAGR
CRYPRKLEAD LWAREAVFST GLGFSFAIPH SKSEHIEQST ISVARLQAPV RWGDDEAQFI
IMLTLNKHAA GDQHMRIFSR LARRIMHEEF RNALVNAASA DAIASLLQHE LEL
|
|---|
| |