Gene SbBS512_E4428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4428 
SymbolmetF 
ID6271656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp4133199 
End bp4134089 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content52% 
IMG OID641728225 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionYP_001882638 
Protein GI187732081 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID[TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTTT TTCACGCCAG CCAGCGGGAT GCCCTGAATC AGAGCCTGGC AGAAGTCCAG 
GGGCAGATTA ACGTTTCGTT CGAGTTTTTC CCGCCGCGTA CCAGTGAAAT GGAGCAGACC 
CTGTGGAACT CCATCGATCG CCTTAGCAGC CTGAAACCGA AGTTTGTATC GGTGACCTAT 
GGCGCGAACT CCGGCGAGCG CGACCGTACG CACAGCATTA TTAAAGGCAT TAAAGATCGC 
ACTGGTCTGG AAGCGGCACC GCATCTTACT TGCATTGATG CGACGCCCGA CGAGTTGCGC 
ACCATTGCAC GCGACTACTG GAATAACGGT ATTCGTCATA TCGTGGCGCT GCGTGGCGAT 
CTGCCGCCGG GAAGTGGTAA GCCAGAAATG TATGCTTCTG ACCTGGTGAC GCTATTAAAA 
GAAGTGGCAG ATTTCGATAT CTCCGTGGCG GCGTATCCGG AAGTTCACCC GGAAGCAAAA 
AGCGCTCAGG CGGATTTGCT TAATCTGAAA CGTAAAGTCG ATGCCGGAGC CAACCGCGCG 
ATTACTCAGT TCTTCTTCGA TGTCGAAAGC TACCTGCGTT TTCGTGACCG CTGTGTATCG 
GCGGGCATTG ATGTGGAAAT TATTCCGGGA ATTTTGCCGG TATCTAACTT TAAACAGGCG 
AAGAAATTTG CCGATATGAC CAACGTGCGT ATTCCGGCGT GGATGGCGCA AATGTTCGAC 
GGCCTAGATG ATGATGCCGA AACCCGCAAA CTGGTGGGCG CGAATATTGC CATGGATATG 
GTGAAGATTT TAAGCCGTGA AGGAGTGAAA GATTTCCACT TCTATACGCT TAACCGCGCT 
GAAATGAGTT ACGCGATTTG CCATACGCTG GGTGTTCGAC CTGGTTTATA A
 
Protein sequence
MSFFHASQRD ALNQSLAEVQ GQINVSFEFF PPRTSEMEQT LWNSIDRLSS LKPKFVSVTY 
GANSGERDRT HSIIKGIKDR TGLEAAPHLT CIDATPDELR TIARDYWNNG IRHIVALRGD 
LPPGSGKPEM YASDLVTLLK EVADFDISVA AYPEVHPEAK SAQADLLNLK RKVDAGANRA 
ITQFFFDVES YLRFRDRCVS AGIDVEIIPG ILPVSNFKQA KKFADMTNVR IPAWMAQMFD 
GLDDDAETRK LVGANIAMDM VKILSREGVK DFHFYTLNRA EMSYAICHTL GVRPGL