| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4418 |
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| Symbol | priA |
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| ID | 6273154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 4120718 |
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| End bp | 4122916 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641728218 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_001882631 |
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| Protein GI | 187732612 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGTTG CCCACGTTGC CTTGCCCGTT CCGCTTCCTC GTACCTTTGA CTATCTGCTG
CCAGAAGGCA TGACGGTTAA AGCCGGGTGT CGCGTGCGCG TGCCGTTTGG CAAACAACAG
GAGCGCATCG GGGTTGTGGT GTCAGTTAGC GATGTCAGTG AGCTGCCGCT TAACGAGCTG
AAAGCGGTAG TGGAAGTGCT GGACGTTGAG CCGGTATTTA CTCACTCCGT CTGGCGGTTA
CTGCTCTGGG CGGCAGATTA CTATCATCAT CCGATTGGCG ATGTGCTGTT TCATGCCTTG
CCGATTTTAC TGCGCCAGGG GCGGCCTGCG GCGAACGCGC CGATGTGGTA CTGGTTTGCC
ACTGAACAAG GCCAGGCGGT GGATCTGAAC AGCCTGAAAC GCTCCCCCAA GCAACAACAG
GCGCTGGCGG CGTTACGGCA AGGCAAAATC TGGCGCGACC AGGTCGCCAC GCTCGAATTT
AATGATGCCG CGTTGCAGGC GCTACGCAAA AAAGGTCTGT GTGATTTAGC AAGTGAAACA
CCAGAGTTTA GCGACTGGCG AACGAACTAT GCCGTTTCTG GTGAGCGGTT GCGATTGAAT
ACCGAACAGG CCACCGCCGT TGGCGCAATT CATAGCGCGG CAGATACTTT TTCTGCCTGG
CTGCTGGCGG GCGTTACCGG TTCCGGTAAA ACGGAGGTTT ATCTCAGTGT ACTGGAAAAC
GTGCTCGCTC AGGGCAAACA GGCGCTGGTG ATGGTGCCGG AAATCGGCCT GACACCGCAA
ACTATCGCCC GTTTTCGTGA ACGTTTTAAT GCCCCCGTGG AAGTTCTGCA TTCCGGCCTG
AACGACAGCG AGCGGCTTTC GGCGTGGTTG AAAGCGAAAA ATGGCGAGGC GGCGATTGTG
ATCGGCACCC GCTCCGCGCT GTTTACGCCG TTTAAAAATC TCGGCGTGAT TGTCATTGAT
GAAGAGCACG ACAGCTCCTA CAAGCAGCAG GAAGGCTGGC GCTATCATGC CCGCGACCTG
GCGGTGTATC GTGCGCACAG CGAGCAAATC CCGATTATTC TTGGCTCCGC AACGCCCGCG
CTGGAAACGT TATGCAACGT CCAGCAGAAA AAATACCGCC TGCTGCGCCT GACCCGTCGG
GCAGGGAATG CGCGTCCGGC AATTCAACAT GTGCTGGATT TAAAAGGTCA GAAGGTGCAG
GCAGGTCTGG CTCCGGCGTT AATCACCCGT ATGCGCCAGC ATTTACAGGC CAACAATCAG
GTTATCCTCT TTCTTAATCG TCGGGGTTTT GCGCCTGCGC TGCTGTGCCA CGACTGCGGC
TGGATAGCCG AATGCCCACG TTGCGATCAC TACTACACGC TGCATCAGGC GCAACAGCAT
TTGCACTGTC ACCACTGTGA CAGTCAGCGT CCGGTGCCGC GCCAGTGCCC TTCCTGCGGT
TCCACGCACC TGGTCCCCGT GGGGCTGGGC ACCGAACAGC TTGAACAGAC GCTTGCGCCG
ATGTTCCCCG GCGTGCCCAT TTCACGTATC GACCGCGATA CCACCAGCCG CAAAGGGGCG
CTGGAACAGC AACTGGCGAA AGTGCATCGC GGCGGCGCGA GGATTTTGAT CGGCACACAA
ATGCTGGCGA AAGGTCACCA CTTTCCGGAT GTGACGCTGG TGGCGTTACT GGATGTGGAC
GGCGCGCTGT TTTCTGCCGA TTTTCGCTCG GCAGAACGTT TCGCCCAGCT TTACACCCAG
GTCGCCGGTC GTGCCGGGCG TGCGGGTAAA CAGGGCGAAG TGGTGCTGCA AACGTACCAT
CCGGAACATC CTCTGTTGCA AACGTTGCTC TATAAAGGCT ACGACGCCTT TGCCGAACAG
GCGCTGGCTG AGCGACGCAT GATGCAGCTG CCGCCGTGGA CCAGCCATGT GATTGTGCGT
GTGGAAGATC ATAACAATCA GCACGCGCCG CTGTTCCTGC AACAACTGCG TAATCTGATC
CTTTCCAGCC CGCTGGCAGA CGACAAACTG TGGATTCTCG GCCCGGTTCC GGCTCTGGCA
CCTAAGCGTG GTGGCCGCTG GCGCTGGCAG ATCTTGTTGC AGCACCCTTC CCGCGTGCGC
TTGCAACACA TCATTAGTGG TACGCTGGCG CTTATTAATA CAATACCGGA TTCCCGCAAG
GTGAAATGGG TGTTGGATGT CGATCCCATC GAAGGCTAA
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| Protein sequence | MPVAHVALPV PLPRTFDYLL PEGMTVKAGC RVRVPFGKQQ ERIGVVVSVS DVSELPLNEL
KAVVEVLDVE PVFTHSVWRL LLWAADYYHH PIGDVLFHAL PILLRQGRPA ANAPMWYWFA
TEQGQAVDLN SLKRSPKQQQ ALAALRQGKI WRDQVATLEF NDAALQALRK KGLCDLASET
PEFSDWRTNY AVSGERLRLN TEQATAVGAI HSAADTFSAW LLAGVTGSGK TEVYLSVLEN
VLAQGKQALV MVPEIGLTPQ TIARFRERFN APVEVLHSGL NDSERLSAWL KAKNGEAAIV
IGTRSALFTP FKNLGVIVID EEHDSSYKQQ EGWRYHARDL AVYRAHSEQI PIILGSATPA
LETLCNVQQK KYRLLRLTRR AGNARPAIQH VLDLKGQKVQ AGLAPALITR MRQHLQANNQ
VILFLNRRGF APALLCHDCG WIAECPRCDH YYTLHQAQQH LHCHHCDSQR PVPRQCPSCG
STHLVPVGLG TEQLEQTLAP MFPGVPISRI DRDTTSRKGA LEQQLAKVHR GGARILIGTQ
MLAKGHHFPD VTLVALLDVD GALFSADFRS AERFAQLYTQ VAGRAGRAGK QGEVVLQTYH
PEHPLLQTLL YKGYDAFAEQ ALAERRMMQL PPWTSHVIVR VEDHNNQHAP LFLQQLRNLI
LSSPLADDKL WILGPVPALA PKRGGRWRWQ ILLQHPSRVR LQHIISGTLA LINTIPDSRK
VKWVLDVDPI EG
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