| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4416 |
|---|
| Symbol | cytR |
|---|
| ID | 6268723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 4119537 |
|---|
| End bp | 4120568 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641728216 |
|---|
| Product | DNA-binding transcriptional regulator CytR |
|---|
| Protein accession | YP_001882629 |
|---|
| Protein GI | 187730930 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.506908 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGTGA AAGCGAAGAA GCAGGAAACT GCCGCGACCA TGAAAGACGT TGCCCTCAAG
GCAAAAGTCT CTACAGCGAC TGTCTCCCGA GCATTAATGA ATCCCGATAA AGTCTCCCAG
GCCACCCGTA ATCGGGTTGA AAAAGCGGCC CGGGAAGTGG GTTATTTACC GCAGCCTATG
GGGCGCAACG TCAAGCGTAA TGAATCCCGC ACCATTCTGG TGATTGTCCC GGATATCTGC
GATCCCTTCT TTAGCGAAAT TATTCGCGGT ATCGAAGTTA CGGCGGCAAA TCACGGATAT
CTGGTGCTGA TTGGCGACTG TGCGCATCAA AATCAGCAGG AAAAAACCTT TATCGATTTG
ATCATCACCA AGCAAATTGA TGGCATGTTG CTGCTGGGTT CAAGGCTGCC GTTTGATGCC
AGCATTGAGG AACAGCGTAA TCTGCCGCCG ATGGTGATGG CGAACGAATT TGCACCGGAA
CTGGAGCTGC CTACCGTTCA TATCGACAAT CTGACCGCCG CATTTGATGC AGTAAATTAT
TTATATGAGC AAGGGCATAA ACGGATTGGC TGTATAGCCG GTCCCGAAGA GATGCCACTG
TGTCACTACC GCCTGCAAGG CTATGTTCAG GCGCTGCGTC GCTGCGGAAT TATGGTTGAT
CCACAATACA TCGCCCGTGG CGACTTCACC TTCGAAGCCG GAAGCAAAGC AATGCAACAG
CTGCTTGATC TTCCACAACC GCCTACTGCA GTCTTCTGCC ATAGCGATGT GATGGCGCTC
GGCGCACTTT CTCAGGCAAA ACGCCAGGGG CTGAAAGTCC CGGAAGACCT TTCCATAATC
GGTTTTGATA ACATCGACCT GACGCAATTT TGTGATCCGC CGCTGACAAC CATCGCGCAG
CCGCGTTACG AAATCGGTCG GGAAGCTATG CTGTTATTGC TTGATCAAAT GCAGGGGCAA
CACGTTGGCA GTGGCTCTCG TTTAATGGAC TGCGAACTTA TCATCCGGGG ATCAACACGC
GCGTTACCTT AA
|
|---|
| Protein sequence | MSVKAKKQET AATMKDVALK AKVSTATVSR ALMNPDKVSQ ATRNRVEKAA REVGYLPQPM
GRNVKRNESR TILVIVPDIC DPFFSEIIRG IEVTAANHGY LVLIGDCAHQ NQQEKTFIDL
IITKQIDGML LLGSRLPFDA SIEEQRNLPP MVMANEFAPE LELPTVHIDN LTAAFDAVNY
LYEQGHKRIG CIAGPEEMPL CHYRLQGYVQ ALRRCGIMVD PQYIARGDFT FEAGSKAMQQ
LLDLPQPPTA VFCHSDVMAL GALSQAKRQG LKVPEDLSII GFDNIDLTQF CDPPLTTIAQ
PRYEIGREAM LLLLDQMQGQ HVGSGSRLMD CELIIRGSTR ALP
|
|---|
| |