Gene SbBS512_E4414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4414 
SymbolhslV 
ID6270844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp4117863 
End bp4118393 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content53% 
IMG OID641728214 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_001882627 
Protein GI187733880 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0890704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAACTA TAGTAAGCGT ACGCCGTAAC GGCCATGTGG TCATCGCTGG TGATGGTCAG 
GCCACGTTGG GCAATACCGT AATGAAAGGC AACGTGAAAA AGGTCCGCCG TCTGTACAAC 
GACAAAGTCA TCGCGGGCTT TGCGGGCGGT ACTGCGGATG CTTTTACGCT GTTCGAACTG 
TTTGAACGTA AACTGGAAAT GCATCAGGGC CATCTGGTTA AAGCCGCCGT TGAGCTGGCA 
AAAGACTGGC GTACCGATCG CATGCTGCGC AAACTTGAAG CACTGCTGGC AGTCGCGGAT 
GAAACTGCAT CGCTTATCAT CACCGGTAAC GGTGACGTGG TGCAGCCAGA AAACGATCTT 
ATTGCTATCG GCTCCGGCGG CCCTTACGCC CAGGCTGCGG CGCGCGCGCT GTTAGAAAAC 
ACTGAACTTA GCGCCCGTGA AATTGCTGAA AAGGCGTTGG ATATTGCAGG CGACATTTGC 
ATCTATACCA ACCATTTCCA CACCATCGAA GAATTAAGCT ACAAAGCGTA A
 
Protein sequence
MTTIVSVRRN GHVVIAGDGQ ATLGNTVMKG NVKKVRRLYN DKVIAGFAGG TADAFTLFEL 
FERKLEMHQG HLVKAAVELA KDWRTDRMLR KLEALLAVAD ETASLIITGN GDVVQPENDL 
IAIGSGGPYA QAAARALLEN TELSAREIAE KALDIAGDIC IYTNHFHTIE ELSYKA