Gene SbBS512_E4412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4412 
SymbolmenA 
ID6272218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp4115529 
End bp4116455 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content54% 
IMG OID641728212 
Product1,4-dihydroxy-2-naphthoate octaprenyltransferase 
Protein accessionYP_001882625 
Protein GI187730321 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.288224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAC AACAAATTAG CCGAACTCAG GCGTGGCTGG AAAGTTTACG ACCTAAAACC 
CTCCCCCTCG CCTTTGCTGC AATTATCGTC GGGACGGCGC TGGCATGGTG GCAAGGTCAT 
TTTGATCCGC TGGTCGCCCT GCTGGCACTG ATTACCGCCG GGCTATTACA GATCCTTTCT 
AACCTCGCCA ATGATTACGG CGATGCGGTA AAAGGCAGCG ATAAACCTGA CCGCATTGGG 
CCGCTACGCG GCATGCAAAA AGGGGTCATT ACCCAGCAAG AGATGAAACG GGCGCTCATT 
ATTACCGTCG TGCTCATCTG TCTCTCCGGG CTGGCACTGG TTGCAGTGGC GTGCCATACG 
CTGGCTGATT TTGTCGGTTT CCTGATTCTT GGCGGGTTGT CGATCATTGC CGCTATCACC 
TACACCGTGG GCAATCGTCC TTATGGTTAT ATCGGTCTGG GGGATATTTC CGTACTGGTT 
TTCTTTGGCT GGTTAAGCGT CATGGGGAGC TGGTATTTAC AGGCTCATAC ATTGATTCCG 
GCACTGATCC TTCCGGCGAC CGCATGCGGC CTGCTGGCAA CGGCAGTACT GAACATTAAT 
AACCTGCGTG ATATCAATAG CGACCGCGAA AACGGCAAAA ACACGCTGGT GGTGCGCTTA 
GGTGAAGTGA ACGCGCGTCG TTATCATGCC TGCCTGCTGA TGGGCTCTCT GGTATGTCTG 
GCGCTGTTTA ATCTCTTTTC GCTGCATAGC CTGTGGGGCT GGCTGTTCCT GCTGGCGGCA 
CCGTTGCTGG TGAAGCAAGC CCGTTATGTG ATGCGGGAAA TGGACCCGGT GGCGATGCGA 
CCGATGCTGG AACGCACTGT CAAGGGGGCG TTACTGACTA ACCTGCTGTT TATTTTAGGG 
ATATTCCTAA GCCAGTGGGC AGCATAA
 
Protein sequence
MTEQQISRTQ AWLESLRPKT LPLAFAAIIV GTALAWWQGH FDPLVALLAL ITAGLLQILS 
NLANDYGDAV KGSDKPDRIG PLRGMQKGVI TQQEMKRALI ITVVLICLSG LALVAVACHT 
LADFVGFLIL GGLSIIAAIT YTVGNRPYGY IGLGDISVLV FFGWLSVMGS WYLQAHTLIP 
ALILPATACG LLATAVLNIN NLRDINSDRE NGKNTLVVRL GEVNARRYHA CLLMGSLVCL 
ALFNLFSLHS LWGWLFLLAA PLLVKQARYV MREMDPVAMR PMLERTVKGA LLTNLLFILG 
IFLSQWAA