| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4381 |
|---|
| Symbol | rhaU |
|---|
| ID | 6272856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 4090625 |
|---|
| End bp | 4090924 |
|---|
| Gene Length | 300 bp |
|---|
| Protein Length | 99 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641728182 |
|---|
| Product | L-rhamnose 1-epimerase |
|---|
| Protein accession | YP_001882595 |
|---|
| Protein GI | 187732331 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3254] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02625] L-rhamnose 1-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCA AAGCCTTTGT CATGCAGGTT AACCCCGACG CCCACGAAGA GTATCAGCGT
CGGCATAACC CCATCTGGCC GGAACTGGAA GCAGTGTTGA AATCTCACGG TGCGCATAAC
TACGCCATTT ACCTCGACAA AGCGCGTAAT CTGCTGTTTG CCACGGTAGA GATTGAATCT
GAAGAACGGT GGAATGCGGT AGCCAGTACT GATGTTTGCC AACGTTGGTG GAAATATATG
ACCGATGTTA TGCCCGCTAA CCCGGATAAC AGCCCGGTGA GTAGCGAGCT GCAAGGGTAA
|
|---|
| Protein sequence | MIRKAFVMQV NPDAHEEYQR RHNPIWPELE AVLKSHGAHN YAIYLDKARN LLFATVEIES
EERWNAVAST DVCQRWWKYM TDVMPANPDN SPVSSELQG
|
|---|
| |