Gene SbBS512_E4365 details

Gene Information

• Locus tag: SbBS512_E4365
• Symbol: dtd
• ID: 6273175
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 4076467
• End bp: 4076904
• Gene Length: 438 bp
• Protein Length: 145 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641728169
• Product: D-tyrosyl-tRNA(Tyr) deacylase
• Protein accession: YP_001882582
• Protein GI: 187732887
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1490] D-Tyr-tRNAtyr deacylase
• TIGRFAM ID: [TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase

Plasmid Coverage information

• Num covering plasmid clones: 51
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGCAT TAATTCAACG CGTAACCCGT GCCAGCGTCA CCGTGGAGGG AGAAGTGACG 
GGCGAAATTG GCGCGGGACT TTTGGTGTTA TTGGGTGTCG AAAAGGATGA CGACGAACAG 
AAAGCAAACC GTCTGTGCGA GCGTGTGCTC GGCTACCGCA TCTTTAGCGA TGCCGAAGGC 
AAGATGAATC TCAACGTGCA ACAGGCGGGC GGCAGTGTAC TGGTGGTTTC CCAGTTTACC 
CTCGCCGCAG ATACCGAACG GGGGATGCGC CCAAGTTTCT CCAAAGGCGC ATCACCGGAT 
CGCGCAGAGG CGTTATATGA CTATTTCGTC GAACGCTGCC GCCAGCAAGA GATGAACACG 
CAAACAGGAC GCTTCGCTGC CGATATGCAG GTATCGCTGG TCAATGATGG CCCCGTGACA 
TTCTGGTTGC AGGTATGA 

 

Protein sequence

MIALIQRVTR ASVTVEGEVT GEIGAGLLVL LGVEKDDDEQ KANRLCERVL GYRIFSDAEG 
KMNLNVQQAG GSVLVVSQFT LAADTERGMR PSFSKGASPD RAEALYDYFV ERCRQQEMNT 
QTGRFAADMQ VSLVNDGPVT FWLQV