| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4348 |
|---|
| Symbol | |
|---|
| ID | 6273198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 4064605 |
|---|
| End bp | 4065393 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641728157 |
|---|
| Product | transcriptional regulator, DeoR/GntR family |
|---|
| Protein accession | YP_001882570 |
|---|
| Protein GI | 187733220 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATCA TCGAAGTGAC AGGTAATCCA CGCCATGACC AACTCGTTCA TCTAATCGCA
GAACGCGGTT ATATGAATAT TGAAGAACTG GCACAACTGC TGGATGTTTC AACGCAAACC
GTGCGCCGGG ATATCCGAAA ACTCAGTGAG CAGGGCTTGA TCACCCGTCA TCATGGAGGG
GCCGGGCGCG TCTCCAGCGT CATGAATACC GCTTTTGAGC AACGGGAACT TTCGCTCACC
GCCGAGAAAC GGGCGATCGC TGAGGCAGTC GCCGATTACC TTCCCGAACG CTGTACCGTC
TTTATCACCA TCGGTACAAC CGTAGAAGCC GTTGCCAGGG CATTACTCAA CCGGCGTGAT
TTACGCATTA TCACTAACAG CCTACGTGTG GCACAGATTC TTTATAAGAA TCAGGATATT
GAAGTGATGG TGCCGGGAGG CACTTTACGC GCTCATAACG GCGGGATTAT CGGCCCAGGA
GCCGTGGATT TTATTGAAGG CTTCCGCGCA GATTATTTAA TCACCAGTAT AGGTGCCATT
GAACATGACG GCACCCTACT GGAATTTGAT GTAAATGAAG CGTTAGTCGC GAGAACGATG
ATTAAACATG CGCGGAATAC ATTGTTAGTG GCCGATCATA CGAAGTTTGC CGCGTCTGCT
GCCGTTTCAA TTGGCAATGC ACGGAATGTC AGGGCTTTTT TTACTGATGC CCCGCCTCCC
AATTCTTTCT GCCAGTTGTT AAGTGAAGAG AATGTTGAAC TGGTGGTTGC CGAGCAAGAA
GTATCCTGA
|
|---|
| Protein sequence | MSIIEVTGNP RHDQLVHLIA ERGYMNIEEL AQLLDVSTQT VRRDIRKLSE QGLITRHHGG
AGRVSSVMNT AFEQRELSLT AEKRAIAEAV ADYLPERCTV FITIGTTVEA VARALLNRRD
LRIITNSLRV AQILYKNQDI EVMVPGGTLR AHNGGIIGPG AVDFIEGFRA DYLITSIGAI
EHDGTLLEFD VNEALVARTM IKHARNTLLV ADHTKFAASA AVSIGNARNV RAFFTDAPPP
NSFCQLLSEE NVELVVAEQE VS
|
|---|
| |