Gene SbBS512_E4315 details

Gene Information

• Locus tag: SbBS512_E4315
• Symbol: fadA
• ID: 6269339
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 4032200
• End bp: 4033363
• Gene Length: 1164 bp
• Protein Length: 387 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 641728125
• Product: 3-ketoacyl-CoA thiolase
• Protein accession: YP_001882545
• Protein GI: 187733041
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0183] Acetyl-CoA acetyltransferase
• TIGRFAM ID: [TIGR01930] acetyl-CoA acetyltransferases; [TIGR02445] fatty oxidation complex, beta subunit FadA

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 0.75003
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACAGG TTGTCATTGT CGATGCAATT CGCACCCCGA TGGGCCGTTC GAAGGGCGGT 
GCTTTTCGTA ACGTGCGTGC AGAAGATCTC TCCGCTCATT TAATGCGTAG CCTGCTGGCG 
CGTAACCCGG CGCTGGAAGC GGCGGCCCTC GACGATATTT ACTGGGGTTG TGTGCAGCAG 
ACGCTGGAGC AGGGTTTTAA TATCGCCCGT AACGCGGCGC TGCTGGCAGA AGTGCCGCAC 
TCTGTCCCGG CGGTTACCGT CAATCGCTTG TGTGGTTCAT CCATGCAGGC ACTGCATGAC 
GCAGCACGAA TGATCATGAC TGGCGATGCG CAGGCATGTC TGGTTGGCGG CGTGGAGCAT 
ATGGGCCATG TGCCAATGAG TCACGGCGTC GATTTTCACC CCGGCCTGAG CCGCAATGTC 
GCCAAAGCGG CGGGCATGAT GGGCTTAACG GCAGAAATGC TGGCGCGTAT GCACGGTATC 
AGCCGTGAAA TGCAGGATGC CTTTGCCGCG CGGTCACACG CCCGCGCCTG GGCCGCCACG 
CAGTCGGGCG CATTTAAAAA TGAAATCATC CCGACCGGTG GTCACGATGC CGACGGCGTC 
CTGAAGCAGT TTAATTACGA CGAGGTGATT CGACCGGAAA CTACCGTGGA AGCCCTCGCC 
ACGCTGCGTC CGGCGTTTGA TCCAGTAAAC GGTACGGTAA CGGCGGGCAC ATCTTCTGCA 
CTTTCCGATG GCGCAGCTGC CATGCTGGTG ATGAGTGAAA GCCGCGCCCA TGAATTAGGT 
CTTAAGCCGC GCGCTCGTGT GCGTTCGATG GCGGTCGTTG GTTGTGACCC ATCGATTATG 
GGTTACGGCC CGGTTCCGGC CTCGAAGCTG GCGCTGAAAA AAGCGGGGCT TTCTGCCAGC 
GATATCGGCG TGTTTGAGAT GAACGAAGCC TTTGCCGCGC AGATCCTGCC GTGCATTAAA 
GATCTCGGGC TAATGGAGCA GATTGACGAG AAGATCAACC TCAATGGTGG TGCGATCGCG 
CTGGGTCATC CGCTGGGCTG TTCCGGTGCG CGTATCAGCA CCACGCTGCT GAATCTGATG 
GAACGCAAAG ACGTTCAGTT TGGTCTGGCG ACGATGTGTA TCGGTCTGGG TCAGGGTATT 
GCGACGGTGT TTGAGCGGGT TTAA 

 

Protein sequence

MEQVVIVDAI RTPMGRSKGG AFRNVRAEDL SAHLMRSLLA RNPALEAAAL DDIYWGCVQQ 
TLEQGFNIAR NAALLAEVPH SVPAVTVNRL CGSSMQALHD AARMIMTGDA QACLVGGVEH 
MGHVPMSHGV DFHPGLSRNV AKAAGMMGLT AEMLARMHGI SREMQDAFAA RSHARAWAAT 
QSGAFKNEII PTGGHDADGV LKQFNYDEVI RPETTVEALA TLRPAFDPVN GTVTAGTSSA 
LSDGAAAMLV MSESRAHELG LKPRARVRSM AVVGCDPSIM GYGPVPASKL ALKKAGLSAS 
DIGVFEMNEA FAAQILPCIK DLGLMEQIDE KINLNGGAIA LGHPLGCSGA RISTTLLNLM 
ERKDVQFGLA TMCIGLGQGI ATVFERV