| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4313 |
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| Symbol | ubiD |
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| ID | 6270749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 4029768 |
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| End bp | 4031261 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641728123 |
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| Product | 3-octaprenyl-4-hydroxybenzoate decarboxylase |
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| Protein accession | YP_001882543 |
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| Protein GI | 187734223 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCCA TGAAATATAA CGATTTACGC GACTTCTTGA CGCTGCTTGA ACAGCAGGGT
GAGCTAAAAC GTATCACGCT CCCGGTGGAT CCGCATCTGG AAATCACTGA AATTGCTGAC
CGCACTTTGC GTGCCGGTGG GCCTGCGCTG TTGTTCGAAA ACCCTAAAGG CTACTCAATG
CCGGTGCTGT GCAACCTGTT CGGTACGCCA AAGCGCGTGG CGATGGGCAT GGGACAGGAA
GATGTTTCGG CGCTGCGTGA AGTTGGTAAA TTATTGGCGT TTCTGAAAGA GCCGGAGCCG
CCAAAAGGTT TCCGCGACCT GTTTGATAAA CTGCCGCAGT TTAAGCAAGT ATTGAACATG
CCGACAAAGC GGCTGCGTGG TGTGCCCTGC CAACAAAAAA TCGTCTCTGG CGATGACGTC
GATCTCAATC GCATTCCCAT TATGACCTGC TGGCCGGAAG ATGCCGCACC GCTGATTACC
TGGGGGCTGA CAGTGACGCG CGGCCCGCAT AAAGAGCGGC AGAATCTGGG CATTTATCGC
CAGCAGCTGA TTGGTAAAAA CAAACTGATT ATGCGCTGGC TGTCGCATCG CGGCGGCGCG
CTGGATTATC AGGAGTGGTG TGCGGCGCAT CCGGGCGAAC GTTTCCCGGT TTCTGTGGCG
CTGGGTGCCG ATCCCGCCAC GATTCTCGGT GCAGTCACCC CCGTTCCGGA TACACTTTCA
GAGTATGCGT TTGCCGGATT GCTGCGCGGT ACCAAGACCG AAGTGGTGAA GTGTATCTCC
AATGACCTTG AAGTGCCCGC CAGTGCGGAG ATTGTGCTGG AAGGGTATAT CGAACAAGGC
GAAACTGCGC CGGAAGGGCC GTATGGCGAC CACACCGGTT ACTATAACGA AGTCGATAGT
TTCCCGGTAT TTACCGTGAC GCATATTACC CAGCGTGAAG ATGCGATTTA CCATTCCACC
TATACCGGGC GTCCGCCAGA TGAGCCCGCG GTACTGGGCG TGGCGTTGAA CGAAGTGTTT
GTACCGATTC TGCAAAAACA GTTCCCGGAA ATTGTCGATT TTTACCTGCC GCCGGAAGGC
TGTTCTTATC GTCTGGCGGT AGTGACGATC AAAAAACAGT ACGCCGGACA CGCGAAGCGC
GTCATGATGG GCGTCTGGTC GTTCTTACGC CAGTTTATGT ACACTAAATT TGTGATCGTT
TGCGATGATG ACGTCAACGC ACGCGACTGG AACGATGTGA TTTGGGCGAT TACCACCCGT
ATGGACCCGG CGCGGGATAC TGTTCTGGTA GAAAATACGC CTATTGATTA TCTGGATTTT
GCCTCGCCTG TCTCCGGGCT GGGTTCAAAA ATGGGGCTGG ATGCCACGAA TAAATGGCCG
GGGGAAACCC AGCGTGAATG GGGACGTCCC ATCAAAAAAG ATCCAGATGT TGTCGCGCAT
ATTGACGCCA TCTGGGATGA ACTGGCTATT TTTAACAACG GTAAAAGCGC CTGA
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| Protein sequence | MDAMKYNDLR DFLTLLEQQG ELKRITLPVD PHLEITEIAD RTLRAGGPAL LFENPKGYSM
PVLCNLFGTP KRVAMGMGQE DVSALREVGK LLAFLKEPEP PKGFRDLFDK LPQFKQVLNM
PTKRLRGVPC QQKIVSGDDV DLNRIPIMTC WPEDAAPLIT WGLTVTRGPH KERQNLGIYR
QQLIGKNKLI MRWLSHRGGA LDYQEWCAAH PGERFPVSVA LGADPATILG AVTPVPDTLS
EYAFAGLLRG TKTEVVKCIS NDLEVPASAE IVLEGYIEQG ETAPEGPYGD HTGYYNEVDS
FPVFTVTHIT QREDAIYHST YTGRPPDEPA VLGVALNEVF VPILQKQFPE IVDFYLPPEG
CSYRLAVVTI KKQYAGHAKR VMMGVWSFLR QFMYTKFVIV CDDDVNARDW NDVIWAITTR
MDPARDTVLV ENTPIDYLDF ASPVSGLGSK MGLDATNKWP GETQREWGRP IKKDPDVVAH
IDAIWDELAI FNNGKSA
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