| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4312 |
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| Symbol | tatD |
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| ID | 6268870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 4028322 |
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| End bp | 4029116 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641728121 |
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| Product | DNase TatD |
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| Protein accession | YP_001882541 |
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| Protein GI | 187732899 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTACA GGATGTTTGA TATCGGCGTT AATTTGACCA GTTCGCAATT TGCGAAAGAC
CGTGATGATG TTGTAGCGCG CGCTTTTGAC GCGGGAGTTA ATGGGCTACT CATCACCGGC
ACTAACCTGC GTGAAAGCCA GCAGGCGCAA AAGCTGGCGC GTCAGTATTC GTCCTGTTGG
TCAACGGCGG GCGTACATCC TCACGACAGC AGCCAGTGGC AAGCTGCGAC TGAAGAAGCG
ATTATTGAGC TGGCCGCGCA GCCAGAAGTG GTGGCGATTG GTGAATGTGG TCTCGACTTT
AACCGCAACT TTTCGACGCC GGAAGAGCAG GAACGCGCTT TTGTTGCTCA GCTACGCATT
GCCGCAGAAT TAAACATGCC GGTATTTATG CACTGTCGCG ATGCCCACGA GCGGTTTATG
ACATTGCTGG AGCCGTGGCT GGATAAACTG CCTGGTGCGG TTCTTCATTG CTTTACCGGC
ACACGCGAAG AGATGCAGGC GTGCGTGGCG CGTGGAATTT ATATCGGCAT TACCGGTTGG
GTTTGCGATG AACGACGCGG GCTGGAGCTG CGGGAATTGT TGCCGTTGAT TCCGGCGGAG
AAATTGCTGA TCGAAACTGA TGCGCCGTAT CTGCTCCCGC GCGATTTCAC GCCAAAGCCA
TCATCCCGGC GCAACGAGCC AGCCCATCTG CACCATATTT TGCAACGTAT TGCGCACTGG
CGTGGAGAAG ATGCCGCATG GCTGGCTGCC ACCACGGATG CCAATGTCAA AACACTGTTT
GGGATTGCGT TTTAG
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| Protein sequence | MEYRMFDIGV NLTSSQFAKD RDDVVARAFD AGVNGLLITG TNLRESQQAQ KLARQYSSCW
STAGVHPHDS SQWQAATEEA IIELAAQPEV VAIGECGLDF NRNFSTPEEQ ERAFVAQLRI
AAELNMPVFM HCRDAHERFM TLLEPWLDKL PGAVLHCFTG TREEMQACVA RGIYIGITGW
VCDERRGLEL RELLPLIPAE KLLIETDAPY LLPRDFTPKP SSRRNEPAHL HHILQRIAHW
RGEDAAWLAA TTDANVKTLF GIAF
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