Gene SbBS512_E4309 details

Gene Information

• Locus tag: SbBS512_E4309
• Symbol: tatB
• ID: 6270905
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 4026998
• End bp: 4027513
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641728119
• Product: sec-independent translocase
• Protein accession: YP_001882539
• Protein GI: 187731700
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1826] Sec-independent protein secretion pathway components
• TIGRFAM ID: [TIGR01410] twin arginine-targeting protein translocase TatB

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTTGATA TCGGTTTTAG CGAACTGCTA TTGGTGTTCA TCATCGGCCT CGTCGTTCTG 
GGGCCGCAAC GACTGCCTGT GGCGGTAAAA ACGGTAGCGG GCTGGATTCG CGCGTTGCGT 
TCACTGGCGA CAACGGTGCA GAACGAACTG ATCCAGGAGT TAAAACTCCA GGAGTTTCAG 
GACAGTCTGA AAAAGGTTGA AAAGGCGAGC CTCACTAACC TGACGCCCGA ACTGAAAGCG 
TCGATGGATG AACTACGCCA GGCCGCGGAG TCGATGAAGC GTTCCTACGT TGCAAACGAT 
CCAGAAAAGG CGAGCGATGA AGCGCACACC ATCCATAACC CGGTGGTGAA AGATAATGAA 
GCTGCGCATG AGGGCGTAAC GCCTGCCGCT GCACAAACGC AGGCCAGTTC GCCGGAACAG 
AAGCCAGAAA CCACGCCAGA GCCGGTGGTA AAACCTGCTG CGGACGCTGA ACCGAAAACC 
GCTGCACCTT CCCCTTCGTC GAGTGATAAA CCGTAA 

 

Protein sequence

MFDIGFSELL LVFIIGLVVL GPQRLPVAVK TVAGWIRALR SLATTVQNEL IQELKLQEFQ 
DSLKKVEKAS LTNLTPELKA SMDELRQAAE SMKRSYVAND PEKASDEAHT IHNPVVKDNE 
AAHEGVTPAA AQTQASSPEQ KPETTPEPVV KPAADAEPKT AAPSPSSSDK P