| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4295 |
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| Symbol | metE |
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| ID | 6270649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 4013739 |
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| End bp | 4016000 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641728106 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_001882526 |
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| Protein GI | 187734249 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATAT TGAATCACAC CCTCGGTTTC CCTCGCGTTG GCCTGCGTCG CGAGCTGAAA
AAAGCGCAAG AGAGTTATTG GGCAGGGAAC TCCACGCGTG AAGAACTGCT GGCGGTAGGG
CGTGAATTGC GTGCTCGTCA CTGGGATCAA CAAAAGCAAG CGGGTATCGA CCTGCTGCCG
GTGGGCGATT TTGCCTGGTA CGATCATGTA CTGACCACCA GTCTGCTGCT GGGTAACGTT
CCGGCGCGTC ATCAGAACAA AGATGGTTCG GTAGATATTG ACACCCTGTT CCGTATTGGT
CGTGGACGTG CGCCGACTGG CGAACCTGCG GCGGCAGCGG AAATGACCAA ATGGTTTAAC
ACCAACTATC ACTACATGGT GCCGGAATTC GTTAAAGGCC AACAGTTCAA ACTGACCTGG
ACGCAGCTGC TGGAGGAAGT GGACGAGGCG CTGGCGCTGG GCCACAACGT TAAGCCTGTG
CTGCTGGGGC CGGTTACCTG GCTGTGGCTG GGGAAAGTGA AAGGTGAACA GTTTGACCGC
CTGAGCCTGC TGAACGACAT TCTGCCGGTT TATCAGCAAG TGCTGGCAGA ACTGGAGAAA
CGCGGCATCG AGTGGGTACA GATTGATGAA CCCGCGCTGG TACTGGAACT ACCACAGGCG
TGGCTGGACG CATACAAACC CGCTTACGAC GCGCTCCAGG GACAGGTGAA ACTGCTGCTG
ACTACCTATT TTGAAGGCGT TACGCCAAAT CTCGACACGA TTACTGCGCT GCCTGTTCAG
GGACTGCATG TGGACCTTGT ACATGGTAAA GATGGCGTTG CTGAACTGCA CAAGCGCCTG
CCTTCTGACT GGCTGCTGTC TGCGGGACTG ATCAATGGTC GTAACGTCTG GCGCGCCGAT
CTTACTGAGA AATATGCGCA AATTAAGGAC ATTGTCGGCA AACGTGATTT GTGGGTGGCA
TCTTCCTGCT CGTTGCTGCA CAGCCCCATC GACCTGAGCG TGGAAACGCG TCTTGATGCA
GAAGTGAAAA GCTGGTTTGC CTTCGCCTTA CAAAAATGCC ATGAACTGGC ACTGCTGCGC
GATGCGCTGA AAAGTGGTGA CACGGCAGCT CTGGCAGAGT GGAGCGCCCC AATTCAGGCG
CGTCGTCACT CTACTCGTGT ACATAATCCG GCGGTAGAAA AGCGTCTGGC GGCGATCACC
GCCCAGGACA GCCAGCGTGC GAATGTCTAT GAAGTGCGTG CTGAAGCCCA GCGTGCGCGT
TTTAAACTGC CAGCGTGGCC GACCACCACG ATTGGTTCCT TCCCGCAAAC CACGGAAATT
CGTACCCTGC GTCTGGATTT CAAAAAGGGC AATCTCGACG CCAACAACTA CCGCACGGGC
ATTGCGGAAC ATATCAAGCA GGCCATTGTT GAGCAGGAAC GTTTGGGACT GGATGTGCTG
GTACATGGCG AGGCCGAGCG TAATGACATG GTGGAATACT TTGGCGAGCA CCTCGACGGA
TTTGTCTTTA CGCAAAACGG TTGGGTACAG AGCTACGGTT CCCGCTGCGT GAAGCCACCG
ATTGTTATTG GTGACGTTAG TCGCCCGGCA CCGATTACCG TGGAGTGGGC GAAGTATGCG
CAATCTCTGA CTGATAAACC GGTGAAAGGG ATGCTGACTG GCCCGGTGAC CATTCTCTGC
TGGTCGTTCC CGCGTGAAGA TGTCAGCCGT GAAACCATCG CCAAACAAAT TGCGCTGGCG
CTGCGTGATG AAGTGGCGGA CCTGGAAGCC GCAGGAATTG GCATCATCCA GATTGATGAA
CCGGCGCTGC GCGAAGGTTT ACCGCTGCGT CGTAGCGACT GGGATGCATA TCTCCAGTGG
GGCGTGGAGG CCTTCCGTAT CAACGCCGCC GTGGCGAAAG ATGACACACA AATCCACACT
CACATGTGTT ATTGCGAGTT CAACGACATC ATGGATTCCA TTGCGGCACT GGATGCAGAC
GTCATCACCA TCGAAACCTC GCGTTCCGAC ATGGAGTTGC TGGAGTCGTT TGAAGAGTTT
GATTATCCGA ATGAAATCGG TCCAGGCGTC TATGACATTC ACTCGCCAAA CGTACCGAGC
GTAGAATGGA TTGAAGCCTT GCTGAAGAAA GCGGCAAAAC GCATTCCGGC AGAGCGCCTG
TGGGTCAACC CGGACTGTGG CCTGAAAACG CGCGGCTGGC CAGAAACCCG CGCGGCACTG
GCGAACATGG TGCAGGCGGC GCAGAATTTG CGTCGGGGAT GA
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| Protein sequence | MTILNHTLGF PRVGLRRELK KAQESYWAGN STREELLAVG RELRARHWDQ QKQAGIDLLP
VGDFAWYDHV LTTSLLLGNV PARHQNKDGS VDIDTLFRIG RGRAPTGEPA AAAEMTKWFN
TNYHYMVPEF VKGQQFKLTW TQLLEEVDEA LALGHNVKPV LLGPVTWLWL GKVKGEQFDR
LSLLNDILPV YQQVLAELEK RGIEWVQIDE PALVLELPQA WLDAYKPAYD ALQGQVKLLL
TTYFEGVTPN LDTITALPVQ GLHVDLVHGK DGVAELHKRL PSDWLLSAGL INGRNVWRAD
LTEKYAQIKD IVGKRDLWVA SSCSLLHSPI DLSVETRLDA EVKSWFAFAL QKCHELALLR
DALKSGDTAA LAEWSAPIQA RRHSTRVHNP AVEKRLAAIT AQDSQRANVY EVRAEAQRAR
FKLPAWPTTT IGSFPQTTEI RTLRLDFKKG NLDANNYRTG IAEHIKQAIV EQERLGLDVL
VHGEAERNDM VEYFGEHLDG FVFTQNGWVQ SYGSRCVKPP IVIGDVSRPA PITVEWAKYA
QSLTDKPVKG MLTGPVTILC WSFPREDVSR ETIAKQIALA LRDEVADLEA AGIGIIQIDE
PALREGLPLR RSDWDAYLQW GVEAFRINAA VAKDDTQIHT HMCYCEFNDI MDSIAALDAD
VITIETSRSD MELLESFEEF DYPNEIGPGV YDIHSPNVPS VEWIEALLKK AAKRIPAERL
WVNPDCGLKT RGWPETRAAL ANMVQAAQNL RRG
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