Gene SbBS512_E4290 details

Gene Information

• Locus tag: SbBS512_E4290
• Symbol: rhtC
• ID: 6269981
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 4008443
• End bp: 4009063
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641728101
• Product: threonine efflux system
• Protein accession: YP_001882521
• Protein GI: 187731315
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein
• TIGRFAM ID: [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein

Plasmid Coverage information

• Num covering plasmid clones: 50
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGATGT TATTTCTCAC CGTCGCCATG GTGCACATTG TGGCGCTTAT GAGCCCCGGT 
CCCGATTTCT TTTTTGTCTC TCAGACCGCT GTCAGTCGTT CCCGTAAAGA AGCGATGATG 
GGCGTGCTGG GTATTACCTG CGGCGTTATG GTTTGGGCAG GGATTGCGTT GCTTGGCCTG 
CATTTGATTA TCGAAAAAAT GGCCTGGCTG CATACGCTGA TTATGGTTGG CGGTGGCCTG 
TATCTCTGCT GGATGGGTTA CCAGATGCTA CGCGGTGCAC TGAAAAAAGA GGCTGTATCT 
GCGCCTGCAC CACAGATTGA GCTGGCGAAA AGCGGGCGCA GTTTCCTGAA AGGTTTACTG 
ACCAATCTCG CTAATCCGAA AGCGATTATC TACTTTGGCT CGGTGTTCTC ATTGTTTGTC 
GGAGATAACG TTGGCACTAC CGCGCGCTGG GGCATTTTTG CGCTGATCAT TGTCGAAACA 
CTGGCGTGGT TTACCGTCGT TGCCAGCCTG TTTGCCCTGC CGCAAATGCG CCGTGGTTAT 
CAACGTCTGG CGAAGTGGAT TGATGGTTTT GCCGGGGCGT TATTTGCCGG ATTTGGCATT 
CATTTGATTA TTTCGCGGTG A 

 

Protein sequence

MLMLFLTVAM VHIVALMSPG PDFFFVSQTA VSRSRKEAMM GVLGITCGVM VWAGIALLGL 
HLIIEKMAWL HTLIMVGGGL YLCWMGYQML RGALKKEAVS APAPQIELAK SGRSFLKGLL 
TNLANPKAII YFGSVFSLFV GDNVGTTARW GIFALIIVET LAWFTVVASL FALPQMRRGY 
QRLAKWIDGF AGALFAGFGI HLIISR