Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4289 |
Symbol | recQ |
ID | 6272636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 4006550 |
End bp | 4008379 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641728100 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_001882520 |
Protein GI | 187734194 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCGCAGG CGGAAGTGTT GAATCTGGAG TCCGGAGCTA AACAGGTTTT ACAAGAAACC TTTGGCTACC AACAGTTTCG CCCCGGCCAG GAAGAAATTA TCGACACTGT GCTTTCCGGT CGCGATTGCC TGGTCGTCAT GCCCACCGGT GGCGGAAAAT CCCTTTGCTA TCAAATTCCT GCCTTATTGC TAAACGGCCT TACCGTGGTT GTTTCACCGC TGATTTCGTT GATGAAAGAT CAGGTGGATC AACTGCAAGC CAACGGCGTG GCGGCGGCGT GCCTTAACTC GACGCAAACC CGCGAGCAGC AACTTGAAGT GATGACAGGC TGCCGCACCG GGCAAATTCG TCTGCTTTAT ATCGCCCCGG AACGCCTGAT GCTGGATAAC TTTCTTGAGC ATCTGGCGCA CTGGAATCCG GTGTTATTAG CCGTTGATGA AGCGCACTGT ATCTCCCAAT GGGGCCACGA TTTCCGCCCG GAATATGCCG CGCTTGGTCA GTTACGCCAG CGTTTCCCGA CCCTGCCGTT TATGGCGCTG ACTGCCACAG CCGACGACAC CACGCGCCAG GATATCGTGC GCTTGCTGGG GCTGAACGAT CCGCTGATTC AAATCAGCAG TTTTGACCGT CCGAATATTC GCTACATGCT GATGGAGAAG TTCAAACCGC TCGATCAGTT GATGCGCTAC GTGCAGGAAC AGCGCGGTAA GTCAGGCATT ATCTACTGCA ACAGCCGCGC GAAAGTAGAA GACACCGCTG CGCGCCTGCA AAGCAAGGGA ATTAGCGCGG CGGCCTATCA TGCTGGGCTG GAAAATAATG TTCGCGCCGA CGTGCAGGAA AAATTTCAGC GCGATGACCT GCAAATTGTG GTGGCGACGG TGGCGTTCGG CATGGGCATC AATAAACCAA ACGTTCGCTT CGTGGTCCAC TTTGATATTC CGCGCAATAT CGAATCCTAT TATCAGGAAA CCGGTCGCGC CGGGCGTGAT GGCCTGCCCG CGGAAGCGAT GCTGTTTTAC GATCCGGCCG ATATGGCGTG GCTGCGCCGT TGCCTGGAAG AGAAGCCGCA GGGGCAGTTA CAGGATATCG AACGTCATAA ACTCAATGCG ATGGGCGCTT TTGCCGAAGC GCAAACTTGC CGTCGTCTGG TATTGCTGAA CTATTTTGGC GAAGGGCGGC AAGAGCCGTG CGGGAACTGC GATATCTGCC TCGATCCGCC GAAACAGTAC GACGGTTCAA CCGATGCTCA GATTGCCCTT TCCACCATTG GTCGTGTGAA TCAGCGGTTT GGGATGGGTT ATGTGGTGGA AGTGATTCGT GGTGCTAATA ACCAGCGTAT CCGCGACTAT GGTCATGACA AACTGAAAGT CTATGGCATG GGCCGTGATA AAAGCCATGA ACATTGGGTG AGCGTGATCC GCCAGCTGAT TCACCTCGGC CTGGTGACGC AAAATATTGC CCAGCATTCT GCCCTACAAC TGACAGAGGC CGCGCGCCCG GTGCTGCGCG GCGAATCCTC TTTGCAACTT GCCGTGCCGC GTATCGTGGC GCTCAAACCG AAAGCGATGC AGAAATCGTT CGGCGGCAAC TATGATCGCA AACTGTTCGC CAAATTACGC AAACTGCGTA AATCGATTGC CGATGAAAGT AATGTCCCGC CGTACGTGGT GTTTAACGAC GCAACCTTGA TTGAGATGGC TGAACAGATG CCGATCACCG CCAGCGAAAT GCTCAGCGTT AACGGCGTTG GGATGCGCAA GCTGGAACGC TTTGGTAAAC CGTTTATGGC GCTGATTCGT GCGCATGTCG ATGGCGACGA CGAAGAGTAG
|
Protein sequence | MAQAEVLNLE SGAKQVLQET FGYQQFRPGQ EEIIDTVLSG RDCLVVMPTG GGKSLCYQIP ALLLNGLTVV VSPLISLMKD QVDQLQANGV AAACLNSTQT REQQLEVMTG CRTGQIRLLY IAPERLMLDN FLEHLAHWNP VLLAVDEAHC ISQWGHDFRP EYAALGQLRQ RFPTLPFMAL TATADDTTRQ DIVRLLGLND PLIQISSFDR PNIRYMLMEK FKPLDQLMRY VQEQRGKSGI IYCNSRAKVE DTAARLQSKG ISAAAYHAGL ENNVRADVQE KFQRDDLQIV VATVAFGMGI NKPNVRFVVH FDIPRNIESY YQETGRAGRD GLPAEAMLFY DPADMAWLRR CLEEKPQGQL QDIERHKLNA MGAFAEAQTC RRLVLLNYFG EGRQEPCGNC DICLDPPKQY DGSTDAQIAL STIGRVNQRF GMGYVVEVIR GANNQRIRDY GHDKLKVYGM GRDKSHEHWV SVIRQLIHLG LVTQNIAQHS ALQLTEAARP VLRGESSLQL AVPRIVALKP KAMQKSFGGN YDRKLFAKLR KLRKSIADES NVPPYVVFND ATLIEMAEQM PITASEMLSV NGVGMRKLER FGKPFMALIR AHVDGDDEE
|
| |