| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4285 |
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| Symbol | rarD |
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| ID | 6271454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 4003959 |
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| End bp | 4004864 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641728097 |
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| Product | RarD protein |
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| Protein accession | YP_001882517 |
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| Protein GI | 187731753 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATGCAA AACAAACGCG GCAGGGCGTA TTACTCGCTC TTGCCGCTTA TTTTATTTGG
GGTATTGCGC CAGCATACTT CAAGCTGATT TACTACGTGC CCGCCGATGA GATCCTGACG
CATCGCGTGA TCTGGTCGTT TTTCTTTATG GTGGTGCTGA TGAGCATTTG CCGCCAGTGG
TCCTATTTAA AAACGCTGAT TCAGACGCCA CAGAAAATTT TTATGCTGGC AGTCTCTGCC
GTGCTGATTG GTGGCAACTG GCTACTGTTT ATCTGGGCGG TGAACAATCA CCATATGCTG
GAAGCGAGCC TTGGTTACTT TATTAACCCG CTGGTGAACA TTGTGCTGGG GATGATTTTC
CTCGGCGAGC GATTCCGCCG GATGCAATGG CTGGCGGTGA TTCTGGCGAT ATGTGGCGTG
TTGGTTCAGT TGTGGACTTT TGGTTCGCTG CCAATCATCG CGCTGGGGCT GGCGTTTAGT
TTTGCCTTCT ACGGACTGGT ACGCAAGAAA ATTGCCGTTG AAGCGCAAAC CGGCATGTTA
ATCGAAACCA TGTGGCTGCT GCCCGTGGCG GCGATTTATC TGTTTGCTAT TGCCGACAGC
TCAACCAGCC ATATGGGGCA AAACCCGATG TTGCTGAATT TGCTGCTGAT CGCCGCCGGT
ATTGTCACCA CCGTACCGCT GTTGTGTTTT ACCGCAGCTG CTACACGCCT GCGTCTCTCC
ACGTTAGGCT TCTTCCAGTA TATTGGCCCG ACGCTGATGT TCCTGTTGGC AGTGACGTTT
TATGGTGAAA AACCGGGTGC CGATAAGATG GTGACCTTCG CCTTTATTTG GGTGGCGCTG
GCAATTTTTG TGATGGATGC GATTTATACG CAGCGTAGAA AAAGGGTAAT GACTCCAACT
TACTGA
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| Protein sequence | MDAKQTRQGV LLALAAYFIW GIAPAYFKLI YYVPADEILT HRVIWSFFFM VVLMSICRQW
SYLKTLIQTP QKIFMLAVSA VLIGGNWLLF IWAVNNHHML EASLGYFINP LVNIVLGMIF
LGERFRRMQW LAVILAICGV LVQLWTFGSL PIIALGLAFS FAFYGLVRKK IAVEAQTGML
IETMWLLPVA AIYLFAIADS STSHMGQNPM LLNLLLIAAG IVTTVPLLCF TAAATRLRLS
TLGFFQYIGP TLMFLLAVTF YGEKPGADKM VTFAFIWVAL AIFVMDAIYT QRRKRVMTPT
Y
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