| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4273 |
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| Symbol | uvrD |
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| ID | 6270497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3994790 |
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| End bp | 3996952 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641728087 |
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| Product | DNA-dependent helicase II |
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| Protein accession | YP_001882507 |
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| Protein GI | 187733738 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTTT CTTACCTGCT CGACAGCCTT AATGACAAAC AGCGCGAAGC GGTGGCCGCG
CCACGCAGCA ACCTTCTGGT GCTGGCGGGC GCGGGCAGTG GTAAGACGCG CGTACTGGTG
CATCGTATCG CCTGGCTGAT GAGCGTGGAA AACTGCTCGC CATACTCGAT TATGGCGGTG
ACGTTTACCA ACAAAGCGGC GGCGGAGATG CGTCATCGTA TCGGGCAGCT AATGGGCACC
AGCCAGGGCG GCATGTGGGT CGGCACCTTC CACGGGCTGG CGCACCGTCT GCTGCGTGCG
CACCATATGG ACGCCAATCT GCCGCAGGAT TTTCAGATCC TCGACAGCGA GGACCAGCTA
CGCCTGCTCA AACGCCTAAT CAAGGCGATG AACCTCGACG AGAAGCAGTG GCCGCCGCGC
CAGGCAATGT GGTACATCAA CAGCCAGAAA GATGAAGGCC TGCGTCCACA TCATATTCAA
AGCTACGGTA ATCCGGTGGA GCAGACCTGG CAGAAGGTGT ATCAGGCGTA TCAGGAAGCG
TGTGACCGCG CGGGCCTGGT GGACTTCGCC GAGCTGCTGC TGCGCGCTCA CGAGTTGTGG
CTTAACAAGC CGCATATCCT GCAACACTAC CGCGAACGTT TTACCAATAT CCTGGTGGAC
GAATTCCAGG ATACCAACAA CATTCAGTAC GCGTGGATCC GCCTGCTGGC GGGCGACACC
GGCAAAGTGA TGATCGTCGG TGATGACGAC CAGTCAATCT ACGGCTGGCG CGGGGCGCAG
GTGGAGAATA TTCAGCGTTT CCTTAATGAT TTCCCCGGTG CCGAAACTAT TCGTCTGGAG
CAAAACTACC GCTCTACCAG CAATATTCTG AGCGCCGCTA ACGCCCTGAT TGAAAACAAT
AACGGGCGTC TGGGTAAAAA ACTGTGGACC GATGGCGCGG ACGGTGAGCC TATTTCCCTC
TATTGCGCTT TTAACGAACT CGATGAAGCG CGTTTTGTGG TTAACCGCAT CAAAACCTGG
CAGGACAACG GCGGGGCGCT TGCCGAGTGC GCCATTCTCT ACCGCAGTAA CGCCCAGTCG
CGTGTGCTGG AAGAAGCACT GTTGCAGGCG AGTATGCCGT ACCGTATTTA CGGCGGGATG
CGCTTCTTCG AACGCCAGGA AATCAAAGAT GCGCTCTCGT ATCTGCGCCT GATTGCCAAC
CGTAACGACG ACGCGGCCTT TGAGCGTGTG GTGAATACGC CAACGCGGGG TATTGGTGAC
CGGACGCTGG ACGTGGTACG TCAGACATCG CGCGATCGCC AGTTAACACT CTGGCAGGCA
TGTCGTGAAC TGTTGCAGGA AAAAGCCCTC GCCGGACGTG CTGCCAGCGC CTTACAGCGG
TTTATGGAAC TGATCGACGC CTTAGCGCAG GAAACTGCCG ATATGCCGCT GCATGTACAG
ACTGACCGGG TAATTAAAGA CTCCGGCCTG CGTACCATGT ACGAGCAGGA GAAGGGCGAA
AAAGGTCAGA CGCGTATCGA AAACTTAGAG GAACTGGTGA CGGCAACGCG CCAGTTCAGC
TACAACGAAG AAGACGAAGA TTTAATGCCG CTGCAGGCGT TCCTATCCCA TGCGGCGCTG
GAAGCAGGCG AAGGGCAGGC GGATACCTGG CAGGATGCGG TACAACTGAT GACCATGCAC
TCGGCGAAAG GTCTGGAGTT CCCGCAGGTG TTTATCGTCG GTATGGAAGA GGGCATGTTC
CCAAGCCAGA TGTCGCTGGA TGAAGGCGGG CGTCTGGAAG AAGAACGCCG TCTGGCCTAC
GTTGGCGTAA CCCGCGCGAT GCAGAAACTG ACGCTGACCT ACGCGGAAAC TCGCCGTCTG
TATGGCAAAG AGGTTTACCA TCGCCCGTCG CGCTTTATTG GCGAGCTGCC GGAAGAGTGT
GTGGAAGAGG TGCGCCTGCG CGCCACGGTA AGCCGCCCGG TCAGCCATCA GCGGATGGGT
ACGCCGATGG TCGAGAACGA CAGCGGCTAC AAGCTCGGCC AGCGTGTACG CCACGCTAAG
TTTGGTGAAG GCACCATCGT CAATATGGAA GGCAGCGGTG AACATAGCCG TTTGCAGGTG
GCATTCCAGG GCCAGGGTAT TAAATGGCTG GTGGCGGCTT ATGCCCGGTT GGAGACGGTG
TGA
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| Protein sequence | MDVSYLLDSL NDKQREAVAA PRSNLLVLAG AGSGKTRVLV HRIAWLMSVE NCSPYSIMAV
TFTNKAAAEM RHRIGQLMGT SQGGMWVGTF HGLAHRLLRA HHMDANLPQD FQILDSEDQL
RLLKRLIKAM NLDEKQWPPR QAMWYINSQK DEGLRPHHIQ SYGNPVEQTW QKVYQAYQEA
CDRAGLVDFA ELLLRAHELW LNKPHILQHY RERFTNILVD EFQDTNNIQY AWIRLLAGDT
GKVMIVGDDD QSIYGWRGAQ VENIQRFLND FPGAETIRLE QNYRSTSNIL SAANALIENN
NGRLGKKLWT DGADGEPISL YCAFNELDEA RFVVNRIKTW QDNGGALAEC AILYRSNAQS
RVLEEALLQA SMPYRIYGGM RFFERQEIKD ALSYLRLIAN RNDDAAFERV VNTPTRGIGD
RTLDVVRQTS RDRQLTLWQA CRELLQEKAL AGRAASALQR FMELIDALAQ ETADMPLHVQ
TDRVIKDSGL RTMYEQEKGE KGQTRIENLE ELVTATRQFS YNEEDEDLMP LQAFLSHAAL
EAGEGQADTW QDAVQLMTMH SAKGLEFPQV FIVGMEEGMF PSQMSLDEGG RLEEERRLAY
VGVTRAMQKL TLTYAETRRL YGKEVYHRPS RFIGELPEEC VEEVRLRATV SRPVSHQRMG
TPMVENDSGY KLGQRVRHAK FGEGTIVNME GSGEHSRLQV AFQGQGIKWL VAAYARLETV
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