| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4252 |
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| Symbol | uhpC |
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| ID | 6271940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3973789 |
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| End bp | 3975108 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641728067 |
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| Product | regulatory protein UhpC |
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| Protein accession | YP_001882488 |
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| Protein GI | 187730063 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00881] phosphoglycerate transporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCCGT TTCTGAAAGC GCCTGCCGAT GCGCCATTAA TGACTGATAA ATATGAAATT
GATGCCCGCT ATCGCTACTG GCGTCGGCAT ATTCTGCTGA CCATCTGGCT GGGTTACGCG
CTGTTTTACT TCACGCGGAA AAGTTTTAAC GCCGCCGTAC CAGAAATCCT TGCTAACGGC
GTGCTCAGCC GTAGCGATAT CGGCCTGTTA GCGACCCTGT TTTACATTAC CTATGGCGTG
TCGAAGTTTG TCTCCGGCAT TGTCAGCGAT CGCTCAAATG CCCGTTATTT TATGGGGATA
GGGCTTATCG CCACGGGCAT TATCAACATT CTGTTTGGCT TCTCGACGTC GCTATGGGCG
TTTGCCGTAC TCTGGGTGCT GAACGCCTTT TTCCAGGGCT GGGGTTCACC GGTGTGTGCG
CGTCTGTTAA CGGCCTGGTA TTCACGTACC GAGCGCGGTG GTTGGTGGGC ATTATGGAAC
ACGGCGCATA ACGTCGGCGG CGCACTCATT CCCATTGTGA TGGCAGCGGT TGCACTACAT
TACGGCTGGC GTGCCGGGAT GATGATTGCT GGTTGTATGG CGATCGTCGT GGGAATTTTT
CTCTGCTGGC GGCTGCGCGA TCGCCCGCAG GCGTTAGGTT TACCGGCGGT CGGTGAATGG
CGACACGACG CGCTGGAGAT AGCTCAACAA CAAGAAGGGG CAGGGCTGAC GCGTAAAGAG
ATCCTCACCA AATATGTGTT GCTGAATCCG TATATCTGGC TGCTTTCGTT TTGCTATGTG
CTGGTCTATG TGGTCCGGGC GGCGATCAAC GACTGGGGCA ATTTGTATAT GTCCGAGACG
CTGGGCGTCG ATCTGGTCAC GGCGAATACG GCAGTGACGA TGTTTGAACT GGGTGGATTT
ATCGGTGCGC TGGTAGCGGG TTGGGGCTCG GACAAATTGT TTAACGGCAA CCGAGGGCCG
ATGAATTTGA TTTTCGCCGC CGGAATTTTG CTTTCAGTCG GCTCCCTGTG GCTGATGCCA
TTTGCCAGCT ACGTGATGCA GGCAACCTGC TTCTTCACCA TTGGTTTTTT TGTCTTTGGC
CCACAGATGT TAATCGGTAT GGCGGCGGCA GAGTGTTCCC ACAAAGAGGC GGCAGGGGCG
GCGACGGGGT TTGTCGGCTT GTTTGCTTAT CTGGGGGCGT CGCTTGCTGG TTGGCCGCTG
GCGAAAGTAC TCGATACCTG GCACTGGAGC GGATTTTTTG TGGTTATCTC TATCGCCGCC
GGGATTTCCG CACTGCTGTT ACTGCCCTTT TTGAACGCCC AGACACCGCG CGAAGCGTGA
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| Protein sequence | MLPFLKAPAD APLMTDKYEI DARYRYWRRH ILLTIWLGYA LFYFTRKSFN AAVPEILANG
VLSRSDIGLL ATLFYITYGV SKFVSGIVSD RSNARYFMGI GLIATGIINI LFGFSTSLWA
FAVLWVLNAF FQGWGSPVCA RLLTAWYSRT ERGGWWALWN TAHNVGGALI PIVMAAVALH
YGWRAGMMIA GCMAIVVGIF LCWRLRDRPQ ALGLPAVGEW RHDALEIAQQ QEGAGLTRKE
ILTKYVLLNP YIWLLSFCYV LVYVVRAAIN DWGNLYMSET LGVDLVTANT AVTMFELGGF
IGALVAGWGS DKLFNGNRGP MNLIFAAGIL LSVGSLWLMP FASYVMQATC FFTIGFFVFG
PQMLIGMAAA ECSHKEAAGA ATGFVGLFAY LGASLAGWPL AKVLDTWHWS GFFVVISIAA
GISALLLLPF LNAQTPREA
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