| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4245 |
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| Symbol | emrD |
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| ID | 6268395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 3967170 |
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| End bp | 3968354 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641728060 |
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| Product | multidrug resistance protein D |
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| Protein accession | YP_001882481 |
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| Protein GI | 187733259 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGGC AAAGAAACGT CAATTTGTTA TTGATGTTGG TATTACTCGT GGCCGTCGGT
CAGATGGCGC AAACCATTTA TATTCCAGCT ATTGCCGATA TGGCGCGCGA TCTCAACGTC
CGTGAAGGGG CGGTGCAGAG CGTAATGGGC GCTTATCTGC TGACTTACGG TGTCTCACAG
CTGTTTTATG GCCCGATTTC CGACCGTGTG GGTCGCCGAC CGGTGATCCT CGTCGGAATG
TCCATTTTTA TGCTGGCAAC GCTGGTCGCG GTCACGACCT CCAGTTTGAC GGTATTGATT
GCCGCCAGCG CGATGCAGGG GATGGGCACC GGCGTTGGCG GCGTAATGGC GCGTACTTTG
CCGCGAGATT TATATGAACG GACACAGTTG CGCCATGCTA ACAGCCTGTT AAACATGGGG
ATTCTCGTCA GTCCGTTGCT CGCACCGCTA ATCGGCGGTC TGCTGGATAC GATGTGGAAC
TGGCGCGCCT GTTATCTCTT TTTGTTGGTT CTTTGTGTTG GTGTGACCTT CAGTATGGCC
CGCTGGATGC CGGAAACGCG TCCGGTCGAT GCACCGCGCA CGCGCCTGCT TACCAGTTAT
AAAACGCTTT TCGGTAACAG CGGTTTTAAC TGTTATTTGC TGATGCTGAT TGGCGGTCTG
GCCGGGATTG CCGCCTTTGA AGCCTGCTCC GGCGTGCTGA TGGGCGCGGT GTTAGGGCTG
AGCAGTATGA CGGTCAGTAT TTTGTTTATT CTGCCGATTC CGGCAGCGTT TTTTGGCGCA
TGGTTTGCCG GACGTCCCAA TAAACGCTTC TCCACGTTAA TGTGGCAGTC GGTTATCTGC
TGCCTGCTGG CTGGCTTGCT GATGTGGATC CCCGACTGGT TTGGCGTGAT GAATGTCTGG
ACGCTGCTCG TTCCCGCCGC GCTGTTCTTT TTCGGTGCCG GGATGCTGTT TCCGCTGGCG
ACCAGCGGCG CGATGGAGCC GTTCCCCTTC CTGGCGGGCA CGGCTGGCGC GCTGGTCGGC
GGTCTGCAAA ACATTGGTTC CGGCGTGCTG GCGTCGCTCT CTGCGATGTT GCCGCAAACC
GGTCAGGGTA GCCTGGGGTT ATTGATGACC TTAATGGGAT GGTTGATCGT GCTGTGCTGG
CTGCCGCTGG CGACGCGGAT GTCGCATCAG GGGCAGCCCG TTTAA
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| Protein sequence | MKRQRNVNLL LMLVLLVAVG QMAQTIYIPA IADMARDLNV REGAVQSVMG AYLLTYGVSQ
LFYGPISDRV GRRPVILVGM SIFMLATLVA VTTSSLTVLI AASAMQGMGT GVGGVMARTL
PRDLYERTQL RHANSLLNMG ILVSPLLAPL IGGLLDTMWN WRACYLFLLV LCVGVTFSMA
RWMPETRPVD APRTRLLTSY KTLFGNSGFN CYLLMLIGGL AGIAAFEACS GVLMGAVLGL
SSMTVSILFI LPIPAAFFGA WFAGRPNKRF STLMWQSVIC CLLAGLLMWI PDWFGVMNVW
TLLVPAALFF FGAGMLFPLA TSGAMEPFPF LAGTAGALVG GLQNIGSGVL ASLSAMLPQT
GQGSLGLLMT LMGWLIVLCW LPLATRMSHQ GQPV
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