Gene SbBS512_E4237 details

Gene Information

• Locus tag: SbBS512_E4237
• ID: 6268421
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 3960963
• End bp: 3962711
• Gene Length: 1749 bp
• Protein Length: 582 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641728056
• Product: PTS system, alpha-glucoside-specific IIBC component
• Protein accession: YP_001882477
• Protein GI: 187730493
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; [COG1264] Phosphotransferase system IIB components
• TIGRFAM ID: [TIGR00826] PTS system, glucose-like IIB component; [TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component; [TIGR02005] PTS system, alpha-glucoside-specific IIBC component

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTCGATG CTGTGTACCA GTGCTCACAG ATGTCTACTT TTTCGCGAAA ACGTAGATCT 
CTACCGCCCA ACGAAAAGCA TGAAAGCGAT CACGAATCCC ATTGGGTCGT CATGTTCTGC 
CGATCGCATC TTCCTATCCT CGCTCCAGGC CTGCCGCATA ACCAATCAGG CTTCCTACTT 
ACAGAATTGA GAAAAGAGGA TGTGGAAATG CTCAGTCAAA TTCAACGCTT TGGCGGCGCG 
ATGTTCACGC CAGTGCTGCT GTTTCCCTTC GCCGGGATTG TGGTGGGTCT TGCCATCTTG 
CTGCAAAACC CGATGTTTGT CGGGGAATCA CTGACCGATC CGAACAGTTT ATTCGCGCAA 
ATCGTACACA TTATTGAAGA GGGCGGTTGG ACGGTATTCC GTAATATGCC GCTGATTTTT 
GCTGTCGGTT TACCCATTGG CCTTGCTAAG CAAGCGCAGG GGCGTGCTTG TCTGGCGGTG 
ATGGTGAGTT TCCTGACCTG GAACTATTTC ATCAACGCGA TGGGAATGAC CTGGGGAAGC 
TACTTCGGCG TCGATTTCAC TCAGGACGCG GTGGCAGGTA GCGGTCTGAC AATGATGGCC 
GGGATTAAAA CCCTCGATAC CAGCATTATC GGCGCAATTA TCATTTCCGG CATTGTGACG 
GCGCTGCATA ACCGTCTGTT CGATAAAAAA CTGCCGGTTT TTCTCGGCAT TTTCCAGGGG 
ACGTCTTATG TGGTGATTAT CGCCTTCCTG GTGATGATCC CCTGTGCCTG GCTGACGTTG 
CTCGGCTGGC CAAAAGTACA AATGGGGATT GAATCTCTGC AAGCGTTCCT GCGTTCGGCG 
GGTGCACTTG GGGTGTGGGT TTACACCTTC CTCGAACGTA TTCTGATCCC AACCGGTTTA 
CACCACTTCA TCTACGGACA GTTTATCTTT GGTCCGGCAG CTGTTGAAGG CGGCATTCAG 
ATGTACTGGG CGCAGCATCT GCAAGAGTTC AGTCTGAGCG CCGAGCCGCT GAAATCGTTG 
TTCCCGGAAG GCGGTTTTGC CCTGCACGGT AACTCAAAAA TCTTTGGTGC CGTGGGCATT 
TCTTTAGCGA TGTACTTCAC TGCCGCACCG GAAAATCGGG TAAAAGTGGC GGGCTTGCTG 
ATTCCCGCAA CCTTAACCGC CATGCTGGCG GCCTCAATGT CGACCGTGAT GTATCTCTTT 
GGTGTGGTGG GCAACATGGG CGGAGGTCTG ATTGACCAGG TTTTACCGCA AAACTGGATC 
CCGATGTTCA GCAACCACGC GGATATGATG CTGACCCAAA TCGCCATTGG GTTGTGCTTT 
ACCCTGCTGT ACTTCGTGGT TTTCCGCACA CTGATTCTGC AATTCAACAT GTGCACGCCG 
GGACGTGAAG ATGCGGAAGT GAAACTCTAC TCAAAAGCCG AATACAAAGC CTCGCGAGGC 
CAAACCACCG CTGCAGAGCC AAAAAAAGAG CTGGATCAGG CTGCCGGTAT CCTGCAAGCC 
CTGGGCGGGG TCGGCAATAT CTCCAGCATT AACAATTGCG CGACGCGTTT ACGTATTGCA 
CTGCATGACA TGTCACAAAC GCTGGATGAC GAAGTCTTTA AAAAGCTGGG AGCGCACGGC 
GTCTTCCGTA GTGGCGATGC CATTCAGGTG ATCATTGGTC TGCATGTATC CCAGCTGCGT 
GAACAGCTCG ATAGCTTAAT TAATTCTCAT CAATCAGCAG AAAATGTTGC CATTACGGAG 
GCAGTATAA 

 

Protein sequence

MFDAVYQCSQ MSTFSRKRRS LPPNEKHESD HESHWVVMFC RSHLPILAPG LPHNQSGFLL 
TELRKEDVEM LSQIQRFGGA MFTPVLLFPF AGIVVGLAIL LQNPMFVGES LTDPNSLFAQ 
IVHIIEEGGW TVFRNMPLIF AVGLPIGLAK QAQGRACLAV MVSFLTWNYF INAMGMTWGS 
YFGVDFTQDA VAGSGLTMMA GIKTLDTSII GAIIISGIVT ALHNRLFDKK LPVFLGIFQG 
TSYVVIIAFL VMIPCAWLTL LGWPKVQMGI ESLQAFLRSA GALGVWVYTF LERILIPTGL 
HHFIYGQFIF GPAAVEGGIQ MYWAQHLQEF SLSAEPLKSL FPEGGFALHG NSKIFGAVGI 
SLAMYFTAAP ENRVKVAGLL IPATLTAMLA ASMSTVMYLF GVVGNMGGGL IDQVLPQNWI 
PMFSNHADMM LTQIAIGLCF TLLYFVVFRT LILQFNMCTP GREDAEVKLY SKAEYKASRG 
QTTAAEPKKE LDQAAGILQA LGGVGNISSI NNCATRLRIA LHDMSQTLDD EVFKKLGAHG 
VFRSGDAIQV IIGLHVSQLR EQLDSLINSH QSAENVAITE AV