Gene SbBS512_E4236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4236 
Symbol 
ID6271926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3958501 
End bp3960162 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content53% 
IMG OID641728054 
Producthypothetical protein 
Protein accessionYP_001882475 
Protein GI187730653 
COG category[R] General function prediction only 
COG ID[COG2985] Predicted permease 
TIGRFAM ID[TIGR01625] AspT/YidE/YbjL antiporter duplication domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATA TAGCATTAAC GGTCAGTATT CTGGCTTTGG TGGCAGTCGT CGGTTTGTTT 
ATCGGCAACG TCAAATTTCG CGGCATAGGA TTAGGTATTG GCGGCGTGCT GTTTGGTGGG
ATCATCGTCG GCCATTTTGT TTCTCAGGCG GGGATGACAT TAAGTAGCGA TATGCTGCAT
GTTATTCAGG AATTTGGCCT GATCCTGTTC GTTTATACCA TCGGGATTCA GGTAGGGCCG
GGCTTCTTTG CCTCATTGCG CGTCTCCGGA TTACGCCTCA ACCTGTTTGC TGTTCTAATC
GTCATCATCG GTGGTCTGGT TACCGCCATC CTGCATAAAC TGTTTGATAT TCCACTGCCG
GTAGTGATGG GGATTTTCTC CGGTGCGGTT ACCAATACGC CAGCGCTGGG GGCAGGGCAG
CAGATCTTGC GCGACCTGGG TACACCAATG GAAATGGTCG ATCAGATGGG GATGAGTTAC
GCGATGGCGT ATCCATTCGG CATTTGCGGG ATTTTGTTCA CCATGTGGAT GTTGCGGGTT
ATTTTCCGCG TCAATGTCGA GACAGAAGCT CAGCAGCACG AGTCTTCACG CACCAATGGC
GGCGCGCTGA TCAAGACTAT CAATATTCGC GTTGAGAACC CTAACCTGCA TGATTTAGCC
ATTAAAGATG TACCGATTCT CAACGGCGAC AAAATTATCT GCTCGCGTCT GAAACGCGAA
GAAACCCTAA AAGTTCCTTC GCCAGATACC ATTATCCAAC TGGGCGATTT GCTGCATCTG
GTGGGGCAGC CAGCGGATTT ACATAATGCG CAACTGGTGA TTGGTCAGGA GGTCGATACT
TCGCTGTCCA CGAAAGGCAC TGATTTGCGC GTCGAGCGTG TGGTGGTCAC CAATGAAAAC
GTGCTCGGAA AACGTATTCG CGACCTGCAC TTTAAAGAAC GCTATGACGT TGTTATCTCG
CGCCTGAACC GTGCCGGGGT CGAACTGGTC GCCAGTGGCG ATATCAGCCT GCAGTTCGGC
GATATCCTCA ATCTGGTGGG GCGTCCGTCC GCAATTGATG CCGTTGCCAA TGTGCTGGGG
AATGCGCAGC AAAAACTGCA ACAGGTTCAG ATGCTGCCAG TGTTTATTGG CATCGGGCTT
GGCGTATTGT TAGGTTCTAT TCCCGTCTTT GTGCCTGGGT TCCCGGCCGC GTTGAAACTG
GGGCTGGCGG GCGGTCCGCT GATTATGGCG TTGATCCTCG GGCGTATCGG CAGTATCGGC
AAGCTGTACT GGTTTATGCC GCCAAGTGCC AACCTCGCGC TGCGGGAGCT GGGGATCGTG
CTGTTCCTCT CGGTCGTTGG TCTGAAATCT GGTGGGGATT TTGTGAATAC CCTGGTCAAT
GGCGAAGGGC TAAGCTGGAT TGGTTATGGT GCCCTGATCA CCGCCGTTCC GCTGATTACT
GTTGGCATTC TGGCGCGGAT GTTAGCCAAA ATGAATTACC TGACCATGTG CGGGATGCTG
GCAGGTTCCA TGACCGATCC TCCGGCGCTG GCGTTTGCTA ATAATCTTCA TCCAACCAGT
GGTGCGGCGG CGCTCTCTTA CGCCACTGTC TATCCGTTAG TGATGTTTCT GCGAATTATC
ACCCCCCAAT TACTGGCGGT GCTCTTCTGG AGTATCGGTT AA
 
Protein sequence
MSDIALTVSI LALVAVVGLF IGNVKFRGIG LGIGGVLFGG IIVGHFVSQA GMTLSSDMLH 
VIQEFGLILF VYTIGIQVGP GFFASLRVSG LRLNLFAVLI VIIGGLVTAI LHKLFDIPLP
VVMGIFSGAV TNTPALGAGQ QILRDLGTPM EMVDQMGMSY AMAYPFGICG ILFTMWMLRV
IFRVNVETEA QQHESSRTNG GALIKTINIR VENPNLHDLA IKDVPILNGD KIICSRLKRE
ETLKVPSPDT IIQLGDLLHL VGQPADLHNA QLVIGQEVDT SLSTKGTDLR VERVVVTNEN
VLGKRIRDLH FKERYDVVIS RLNRAGVELV ASGDISLQFG DILNLVGRPS AIDAVANVLG
NAQQKLQQVQ MLPVFIGIGL GVLLGSIPVF VPGFPAALKL GLAGGPLIMA LILGRIGSIG
KLYWFMPPSA NLALRELGIV LFLSVVGLKS GGDFVNTLVN GEGLSWIGYG ALITAVPLIT
VGILARMLAK MNYLTMCGML AGSMTDPPAL AFANNLHPTS GAAALSYATV YPLVMFLRII
TPQLLAVLFW SIG