Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4225 |
Symbol | recF |
ID | 6268722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 3949435 |
End bp | 3950508 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641728045 |
Product | recombination protein F |
Protein accession | YP_001882466 |
Protein GI | 187732412 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.164466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCTCA CCCGCTTGTT GATCCGCGAT TTCCGCAATA TCGAAACCGC GGATCTCGCC TTATCTCCCG GCTTTAACTT TCTGGTAGGT GCCAACGGCA GTGGCAAAAC CAGCGTGCTG GAAGCCATCT ATACGCTCGG CCATGGTCGG GCGTTTCGCA GTTTGCAGAT TGGTCGCGTC ATTCGCCATG AGCAGGAGGC ATTTGTTCTC CATGGGCGAT TACAGGGCGA AGAGCGCGAG ACGGCGATTG GCTTAACCAA AGACAAACAA GGCGACAGCA AAGTCCGCAT CGACGGTACT GACGGGCATA AAGTCGCGGA GCTGGCGCAC CTGATGCCGA TGCAGCTGAT AACGCCAGAA GGGTTTACTT TACTCAACGG CGGCCCCAAA TACAGAAGAG CATTTCTCGA CTGGGCATGC TTTCACAACG AACCCGGATT TTTCACCGCC TGGAGCAATC TCAAGCGATT GCTCAAGCAG CGCAATGCGG CGCTGCGCCA GGTGACACGT TACGAACAGC TACGCCCGTG GGATAAAGAG CTGATCCCGC TGGCGGAGCA AATCAGCACC TGGCGCGCGG AGTATAGCGC CGGTATCGCG GCTGATATGG CCGATACTTG TAAGCAATTT CTCCCTGAGT TTTCTCTGAC TTTCTCTTTC CAGCGCGGCT GGGAGAAAGA GACAGAATAT GCTGAGGTGC TGGAACGTAA TTTTGAACGC GATCGCCTGC TAACCTACAC CGCGCATGGC CCGCATAAAG CGGACTTACG CATTCGCGCC GACGGTGCGC CGGTGGAAGA TACCTTATCG CGTGGGCAGC TTAAGCTGTT GATGTGCGCC TTACGTCTGG CGCAAGGAGA GTTCCTCACC CGTGAAAGCG GGCGGCGGTG TCTCTACCTG ATAGATGATT TTGCCTCTGA GCTTGATGAT GAGCGTCGCG GGCTGCTTGC CAGCCGCTTA AAAGCGACGC AATCACAGGT CTTTGTCAGC GCGATCAGTG CTGAACACGT TATAGACATG TCGGACGAAA ATTCGAAGAT GTTTACCGTG GAAAAGGGTA AAATAACGGA TTAA
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Protein sequence | MSLTRLLIRD FRNIETADLA LSPGFNFLVG ANGSGKTSVL EAIYTLGHGR AFRSLQIGRV IRHEQEAFVL HGRLQGEERE TAIGLTKDKQ GDSKVRIDGT DGHKVAELAH LMPMQLITPE GFTLLNGGPK YRRAFLDWAC FHNEPGFFTA WSNLKRLLKQ RNAALRQVTR YEQLRPWDKE LIPLAEQIST WRAEYSAGIA ADMADTCKQF LPEFSLTFSF QRGWEKETEY AEVLERNFER DRLLTYTAHG PHKADLRIRA DGAPVEDTLS RGQLKLLMCA LRLAQGEFLT RESGRRCLYL IDDFASELDD ERRGLLASRL KATQSQVFVS AISAEHVIDM SDENSKMFTV EKGKITD
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