Gene SbBS512_E4192 details

Gene Information

• Locus tag: SbBS512_E4192
• Symbol: glmS
• ID: 6269482
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 3916634
• End bp: 3918463
• Gene Length: 1830 bp
• Protein Length: 609 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 641728013
• Product: glucosamine--fructose-6-phosphate aminotransferase
• Protein accession: YP_001882434
• Protein GI: 187733589
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains
• TIGRFAM ID: [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing)

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGTGGAA TTGTTGGCGC GATCGCGCAA CGTGATGTAG CAGAAATCCT TCTTGAAGGT 
TTACGTCGTC TGGAATACCG CGGATATGAC TCTGCCGGTC TGGCCGTTGT TGATGCGGAA 
GGTCATATGA CCCGCCTGCG TCGCCTCGGT AAAGTCCAGA TGCTGGCTCA GGCAGCGGAA 
GAACATCCTC TGCATGGCGG CACCGGTATT GCTCACACTC GCTGGGCGAC CCACGGTGAA 
CCTTCAGAAG CTAACGCGCA TCCGCATGTT TCTGAACACA TTATGGTGGT GCATAACGGC 
ATCATCGAAA ACCATGAACC GCTGCGTGAA GAGTTAAAAG CGCGTGGCTA TACCTTCGTT 
TCTGAAACCG ACACCGAAGT GATTGCCCAT CTGGTGAACT GGGAGCTGAA ACAAGGCGGG 
ACTCTGCGTG AGGCTGTTCT GCGTGCTATC CCGCAGCTGC GCGGTGCGTA CGGTACAGTG 
ATCATGGACT CCCGTCACCC GGATACCCTG CTGGCGGCAC GTTCTGGTAG TCCGCTGGTG 
ATTGGCCTGG GTATGGGCGA AAACTTTATC GCTTCTGACC AGCTGGCGCT GCTGCCGGTG 
ACCCGTCGCT TTATCTTCCT TGAAGAGGGC GATATTGCGG AAATTACTCG CCGTTCGGTA 
AACATCTTCG ATAAAACTGG CGCGGAAGTA AAACGTCAGG ATATCGAATC CAATCTGCAA 
TATGACGCGG GCGATAAAGG TATTTACCGT CACTACATGC AGAAAGAGAT CTACGAACAG 
CCGAACGCGA TCAAAAACAC CCTTACCGGG CGCATCAGCC ACGGTCAGGT TGATTTAAGC 
GAGCTGGGAC CGAACGCCGA CGAACTGCTG TCGAAGGTTG AGCATATTCA GATCCTCGCC 
TGTGGTACTT CTTATAACTC CGGTATGGTT TCCCGCTACT GGTTTGAATC GCTGGCAGGT 
ATTCCGTGCG ACGTCGAAAT CGCCTCTGAA TTCCGCTATC GTAAATCTGC CGTGCGTCGT 
AACAGCCTGA TGATCACCTT GTCACAGTCT GGCGAAACCG CGGATACCCT GGCGGGCCTG 
CGTCTGTTGA AAGAGCTGGG TTACCTTGGT TCGCTGGCAA TCTGTAACGT TCCGGGTTCT 
TCTCTGGTGC GCGAATCCGA TCTGGCGCTG ATGACCAACG CGGGTACGGA AATCGGCGTG 
GCGTCCACTA AAGCATTCAC CACTCAGTTA ACTGTGCTGT TGATGCTGGT GGCGAAGCTG 
TCTCGCCTGA AAGGTCTGGA TGCCTCCATT GAACATGACA TTGTGCATGG TCTGCAGGCG 
CTGCCGAGCC GTATTGAGCA GATGCTATCT CAGGACAAAC GCATTGAAGC TCTGGCAGAA 
GATTTCTCTG ACAAACATCA CGCACTGTTC CTGGGCCGTG GCGATCAGTA CCCAATCGCA 
CTGGAAGGCG CATTGAAGCT GAAAGAGATC TCCTACATTC ACGCTGAAGC CTACGCTGCT 
GGCGAGCTGA AACACGGCCC GCTGGCGCTG ATTGACGCGG ATATGCCGGT TATCGTCGTT 
GCACCGAACA ACGAACTGTT GGAAAAACTG AAATCCAACA TTGAAGAAGT TCGCGCGCGT 
GGCGGTCAGT TGTATGTCTT CGCCGATCAG GATGCGGGTT TTGTAAGTAG CGATAACATG 
CACATCATCG AGATGCCGCA TGTGGAAGAG GTGATTGCAC CGATCTTCTA CACCGTTCCG 
CTGCAGCTGC TGGCTTACCA TGTCGCGCTG ATCAAAGGCA CCGACGTTGA CCAGCCGCGT 
AACTTGGCAA AATCGGTTAC GGTTGAGTAA 

 

Protein sequence

MCGIVGAIAQ RDVAEILLEG LRRLEYRGYD SAGLAVVDAE GHMTRLRRLG KVQMLAQAAE 
EHPLHGGTGI AHTRWATHGE PSEANAHPHV SEHIMVVHNG IIENHEPLRE ELKARGYTFV 
SETDTEVIAH LVNWELKQGG TLREAVLRAI PQLRGAYGTV IMDSRHPDTL LAARSGSPLV 
IGLGMGENFI ASDQLALLPV TRRFIFLEEG DIAEITRRSV NIFDKTGAEV KRQDIESNLQ 
YDAGDKGIYR HYMQKEIYEQ PNAIKNTLTG RISHGQVDLS ELGPNADELL SKVEHIQILA 
CGTSYNSGMV SRYWFESLAG IPCDVEIASE FRYRKSAVRR NSLMITLSQS GETADTLAGL 
RLLKELGYLG SLAICNVPGS SLVRESDLAL MTNAGTEIGV ASTKAFTTQL TVLLMLVAKL 
SRLKGLDASI EHDIVHGLQA LPSRIEQMLS QDKRIEALAE DFSDKHHALF LGRGDQYPIA 
LEGALKLKEI SYIHAEAYAA GELKHGPLAL IDADMPVIVV APNNELLEKL KSNIEEVRAR 
GGQLYVFADQ DAGFVSSDNM HIIEMPHVEE VIAPIFYTVP LQLLAYHVAL IKGTDVDQPR 
NLAKSVTVE