Gene SbBS512_E4190 details

Gene Information

• Locus tag: SbBS512_E4190
• Symbol: atpC
• ID: 6273126
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 3914332
• End bp: 3914751
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641728011
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_001882432
• Protein GI: 187732621
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAATGA CTTACCACCT GGACGTCGTC AGCGCAGAGC AACAAATGTT CTCTGGTCTG 
GTCGAGAAAA TCCAGGTAAC GGGTAGCGAA GGTGAACTGG GGATCTACCC TGGCCACGCA 
CCGCTGCTCA CCGCCATTAA GCCTGGTATG ATTCGCATCG TGAAACAGCA CGGTCACGAA 
GAGTTTATCT ATCTGTCTGG CGGCATTCTT GAAGTGCAGT CTGGCAACGT GACCGTTCTG 
GCCGACACCG CAATTCGCGG CCAGGATCTC GACGAAGCGC GAGCCATGGA AGCGAAACGT 
AAGGCTGAAG AGCACATTAG CAGCTCTCAC GGCGACGTAG ATTACGCTCA GGCGTCTGCG 
GAACTGGCCA AAGCGATCGC GCAGCTGCGC GTTATCGAGT TGACCAAAAA AGCGATGTAA 

 

Protein sequence

MAMTYHLDVV SAEQQMFSGL VEKIQVTGSE GELGIYPGHA PLLTAIKPGM IRIVKQHGHE 
EFIYLSGGIL EVQSGNVTVL ADTAIRGQDL DEARAMEAKR KAEEHISSSH GDVDYAQASA 
ELAKAIAQLR VIELTKKAM