| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4187 |
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| Symbol | atpA |
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| ID | 6272020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3910447 |
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| End bp | 3911988 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641728008 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_001882429 |
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| Protein GI | 187731460 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00431542 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTGA ATTCCACCGA AATCAGCGAA CTGATCAAGC AGCGCATTGC TCAGTTCAAT
GTTGTGAGTG AAGCTCACAA CGAAGGTACT ATTGTTTCTG TAAGTGACGG TGTTATCCGC
ATTCACGGCC TGGCCGATTG TATGCAGGGT GAAATGATCT CCCTGCCGGG TAACCGTTAC
GCTATCGCAC TGAACCTCGA GCGCGACTCT GTAGGTGCGG TTGTTATGGG TCCGTACGCT
GACCTTGCCG AAGGCATGAA AGTTAAGTGT ACTGGCCGTA TCCTGGAAGT TCCGGTTGGC
CGTGGCCTGC TGGGCCGTGT GGTTAACACT CTGGGTGCAC CAATCGACGG TAAAGGTCCG
CTGGATCACG ATGGCTTCTC TGCTGTAGAA GCAATCGCTC CGGGCGTTAT CGAACGTCAG
TCCGTAGATC AGCCGGTACA GACCGGTTAT AAAGCCGTTG ACTCCATGAT CCCAATCGGT
CGTGGTCAGC GTGAATTGAT CATCGGTGAC CGTCAGACAG GTAAAACCGC ACTGGCTATC
GATGCCATCA TCAACCAGCG CGATTCCGGT ATCAAATGTA TCTATGTCGC TATCGGCCAG
AAAGCGTCCA CCATTTCTAA CGTGGTACGT AAACTGGAAG AGCACGGCGC ACTGGCTAAC
ACCATCGTTG TGGTAGCAAC CGCGTCTGAA TCCGCTGCAC TGCAATACCT GGCACCGTAT
GCCGGTTGCG CAATGGGCGA ATACTTCCGT GACCGCGGTG AAGATGCGCT GATCATTTAC
GATGACCTGT CTAAACAGGC TGTTGCTTAC CGTCAGATCT CCCTGCTGCT CCGTCGTCCG
CCAGGACGTG AAGCATTCCC GGGCGACGTT TTCTACCTCC ACTCTCGTCT GCTGGAGCGT
GCTGCACGTG TTAACGCCGA ATACGTTGAA GCCTTCACCA AAGGTGAAGT GAAAGGGAAA
AACGGTTCTC TGACCGCACT GCCGATTATC GAAACTCAGG CGGGTGACGT TTCTGCGTTC
GTTCCGACCA ACGTAATCTC CATTACCGAT GGTCAGATCT TCCTGGAAAC CAACCTGTTC
AACGCCGGTA TTCGTCCTGC GGTTAACCCG GGTATTTCCG TATCCCGTGT TGGTGGTGCA
GCACAGACCA AGATCATGAA AAAACTGTCC GGTGGTATCC GTACCGCTCT GGCACAGTAT
CGTGAACTGG CAGCGTTCTC TCAGTTTGCA TCCGACCTTG ACGATGCAAC ACGTAAGCAG
CTTGACCACG GTCAGAAAGT GACCGAACTG CTGAAACAGA AACAGTATGC GCCGATGTCC
GTTGCGCAGC AGTCTCTGGT TCTGTTCGCA GCAGAACGTG GTTACCTGGC GGATGTTGAA
CTGTCGAAAA TTGGCAGCTT CGAAGCCGCT CTGCTGGCTT ACGTCGACCG TGATCACGCT
CCGTTGATGC AAGAGATCAA CCAGACCGGT GGCTACAACG ACGAAATCGA AGGCAAACTG
AAAGGCATCC TCGATTCCTT CAAAGCAACC CAATCCTGGT AA
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| Protein sequence | MQLNSTEISE LIKQRIAQFN VVSEAHNEGT IVSVSDGVIR IHGLADCMQG EMISLPGNRY
AIALNLERDS VGAVVMGPYA DLAEGMKVKC TGRILEVPVG RGLLGRVVNT LGAPIDGKGP
LDHDGFSAVE AIAPGVIERQ SVDQPVQTGY KAVDSMIPIG RGQRELIIGD RQTGKTALAI
DAIINQRDSG IKCIYVAIGQ KASTISNVVR KLEEHGALAN TIVVVATASE SAALQYLAPY
AGCAMGEYFR DRGEDALIIY DDLSKQAVAY RQISLLLRRP PGREAFPGDV FYLHSRLLER
AARVNAEYVE AFTKGEVKGK NGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLETNLF
NAGIRPAVNP GISVSRVGGA AQTKIMKKLS GGIRTALAQY RELAAFSQFA SDLDDATRKQ
LDHGQKVTEL LKQKQYAPMS VAQQSLVLFA AERGYLADVE LSKIGSFEAA LLAYVDRDHA
PLMQEINQTG GYNDEIEGKL KGILDSFKAT QSW
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