Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4180 |
Symbol | gidA |
ID | 6271220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 3904671 |
End bp | 3906560 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641728001 |
Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
Protein accession | YP_001882422 |
Protein GI | 187732565 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000130202 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTTATC CGGATCCTTT TGACGTCATC ATCATTGGCG GGGGTCATGC AGGCACCGAG GCCGCGATGG CCGCGGCGCG TATGGGTCAA CAGACTCTGC TTTTGACACA CAATATCGAC ACTCTGGGGC AGATGAGCTG CAACCCGGCG ATCGGCGGTA TTGGGAAGGG ACATCTGGTA AAAGAAGTGG ATGCACTCGG CGGTCTGATG GCGAAAGCGA TCGATCAAGC GGGTATCCAG TTTAGGATAC TAAACGCAAG CAAAGGACCG GCGGTTCGCG CTACCCGAGC TCAGGCGGAT CGTGTGCTCT ACCGTCAGGC GGTACGTACG GCGCTGGAGA ACCAACCGAA CCTGATGATC TTCCAGCAGG CGGTTGAAGA TCTTATTGTC GAAAACGATC GAGTGGTCGG TGCTGTTACC CAAATGGGAC TGAAGTTCCG TGCCAAAGCC GTCGTGCTCA CCGTTGGGAC GTTCCTCGAC GGTAAAATTC ATATCGGTCT GGATAATTAC AGCGGTGGCC GTGCTGGTGA TCCGCCGTCC ATTCCGCTTT CTCGCCGTTT GCGTGAACTG CCGCTGCGCG TTGGTCGTCT GAAAACCGGG ACACCACCGC GTATTGATGC TCGAACTATC GACTTTAGTG TGCTGGCGCA ACAGCATGGC GGTAACCCAA TGCCGGTATT CTCGTTTATG GGCAATGCGT CCCAGCATCC CCAGCAGGTG CCGTGTTATA TCACTCATAC CAACGAGAAA ACCCATGATG TGATCCGCAG TAACCTCGAT CGTAGCCCAA TGTATGCAGG GGTGATCGAA GGTGTCGGCC CACGCTACTG CCCGTCGATC GAAGACAAAG TCATGCGCTT CGCCGACAGA AATCAGCATC AGATCTTCCT TGAACCGGAA GGACTGACCT CTAATGAAAT TTATCCGAAC GGTATCTCCA CCAGCCTGCC GTTCGATGTG CAGATGCAAA TCGTCCGCTC TATGCAGGGG ATGGAAAACG CGAAGATCGT GCGTCCGGGT TATGCCATTG AGTATGACTT CTTCGATCCT CGCGACCTGA AACCGACGCT GGAGAGCAAG TTTATCCAGG GGCTGTTCTT TGCTGGTCAG ATTAACGGCA CTACCGGTTA CGAAGAAGCC GCTGCGCAAG GTTTGCTGGC CGGTCTTAAC GCTGCCCGTC TGTCTGCTGA CAAAGAAGGT TGGGCTCCGG CACGTTCTCA GGCGTATCTC GGCGTACTAG TTGATGACCT GTGCACTTTA GGAACCAAAG AACCGTATCG TATGTTTACT TCGCGCGCAG AATATCGTCT GATGCTACGC GAAGATAATG CGGATTTGCG TTTGACTGAA ATCGGTCGTG AACTGGGCCT GGTGGATGAC GAACGTTGGG CGCGCTTTAA CGAGAAACTT GAGAATATCG AGCGTGAGCG TCAGCGTCTG AAATCGACCT GGGTAACCCC GTCGGCGGAA GCTGCAGCCG AAGTGAATGC TCACCTGACT GCGCCGCTTT CCCGTGAAGC CAGTGGTGAA GATCTGCTGC GTCGTCCGGA AATGACTTAT GAAAAATTAA CCACGCTGAC GCCGTTTGCC CCTGCGTTGA CAGACGAACA GGCGGCGGAA CAGGTTGAGA TTCAGGTTAA ATACGAAGGT TATATCGCGC GCCAGCAAGA TGAGATCGAA AAGCAGCTGC GTAACGAGAA CACCCTGCTA CCCGCGACAC TGGATTACCG CCAGGTATCC GGTCTTTCTA ACGAAGTGAT CGCCAAACTT AACGATCACA AACCAGCCTC TATCGGCCAA GCTTCGCGTA TTTCTGGCGT CACGCCTGCG GCCATCTCCA TTCTGCTGGT GTGGCTGAAA AAACAGGGTA TGCTGCGTCG TAGCGCATAA
|
Protein sequence | MFYPDPFDVI IIGGGHAGTE AAMAAARMGQ QTLLLTHNID TLGQMSCNPA IGGIGKGHLV KEVDALGGLM AKAIDQAGIQ FRILNASKGP AVRATRAQAD RVLYRQAVRT ALENQPNLMI FQQAVEDLIV ENDRVVGAVT QMGLKFRAKA VVLTVGTFLD GKIHIGLDNY SGGRAGDPPS IPLSRRLREL PLRVGRLKTG TPPRIDARTI DFSVLAQQHG GNPMPVFSFM GNASQHPQQV PCYITHTNEK THDVIRSNLD RSPMYAGVIE GVGPRYCPSI EDKVMRFADR NQHQIFLEPE GLTSNEIYPN GISTSLPFDV QMQIVRSMQG MENAKIVRPG YAIEYDFFDP RDLKPTLESK FIQGLFFAGQ INGTTGYEEA AAQGLLAGLN AARLSADKEG WAPARSQAYL GVLVDDLCTL GTKEPYRMFT SRAEYRLMLR EDNADLRLTE IGRELGLVDD ERWARFNEKL ENIERERQRL KSTWVTPSAE AAAEVNAHLT APLSREASGE DLLRRPEMTY EKLTTLTPFA PALTDEQAAE QVEIQVKYEG YIARQQDEIE KQLRNENTLL PATLDYRQVS GLSNEVIAKL NDHKPASIGQ ASRISGVTPA AISILLVWLK KQGMLRRSA
|
| |