| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4178 |
|---|
| Symbol | asnC |
|---|
| ID | 6270702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 3903301 |
|---|
| End bp | 3903759 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641727999 |
|---|
| Product | DNA-binding transcriptional regulator AsnC |
|---|
| Protein accession | YP_001882420 |
|---|
| Protein GI | 187730647 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.0542256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATT ATCTGATCGA CAATCTGGAC CGTGGAATCC TGGAAGCATT AATGGGCAAT
GCGCGCACCG CTTACGCCGA ACTGGCGAAA CAATTTGGCG TCAGTCCGGG GACGATTCAC
GTTCGGGTAG AGAAAATGAA GCAGGCGGGG ATCATTACCG GGGCGCGTAT TGATGTCAGC
CCGAAGCAGC TCGGTTATGA CGTAGGCTGC TTTATCGGCA TTATATTAAA GAGCGCCAAA
GACTACCCTT CCGCGCTGGC AAAGCTGGAA AGCCTTGATG AAGTCACTGA AGCCTATTAC
ACAACAGGCC ACTACAGCAT CTTTATAAAA GTAATGTGCC GTTCGATCGA CGCTCTCCAG
CATGTACTTA TCAACAAGAT CCAAACAATT GATGAAATTC AGTCCACCGA GACATTGATC
GTCCTGCAAA ACCCGATCAT GCGTACTATC AAGCCCTGA
|
|---|
| Protein sequence | MENYLIDNLD RGILEALMGN ARTAYAELAK QFGVSPGTIH VRVEKMKQAG IITGARIDVS
PKQLGYDVGC FIGIILKSAK DYPSALAKLE SLDEVTEAYY TTGHYSIFIK VMCRSIDALQ
HVLINKIQTI DEIQSTETLI VLQNPIMRTI KP
|
|---|
| |