Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4172 |
Symbol | rbsD |
ID | 6272460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 3895097 |
End bp | 3895516 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641727993 |
Product | D-ribose pyranase |
Protein accession | YP_001882414 |
Protein GI | 187732282 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1869] ABC-type ribose transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 62 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG GCACCGTTCT TAATTCTGAT ATTTCATCGG TGATCTCCCG TCTGGGACAT ACCGATACGC TGGTGGTGTG TGATGCTGGT TTACCCATCC CCAAAAGTAC AACGCGTATC GATATGGCAT TAACCCAGGG TGTACCTTCT TTTATGCAGG TGCTGGGCGT CGTTACAAAT GAAATGCAGG TCGAGGCTGC CATTATCGCG GAAGAGATCA AACAACATAA TCCGCAACTC CACGAAACGT TGCTCACTCA CCTTGAGCAG CTGCAAAAAC ACCAGGGAAA TACCATTGAA ATTCGTTACA CCACGCATGA ACAATTCAAA CAACAAACCG CAGAAAGTCA GGCGGTAATT CGCAGCGGAG AATGTTCTCC GTATGCGAAT ATCATTCTCT GTGCTGGCGT GACGTTCTGA
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Protein sequence | MKKGTVLNSD ISSVISRLGH TDTLVVCDAG LPIPKSTTRI DMALTQGVPS FMQVLGVVTN EMQVEAAIIA EEIKQHNPQL HETLLTHLEQ LQKHQGNTIE IRYTTHEQFK QQTAESQAVI RSGECSPYAN IILCAGVTF
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