Gene SbBS512_E4164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4164 
Symbol 
ID6269017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp3887591 
End bp3888283 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content49% 
IMG OID641727989 
Producttranscriptional regulator, GntR family 
Protein accessionYP_001882410 
Protein GI187733331 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0000000000255806 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTAA GCGCACAACA GTTAGCTGCA CAGAAAAACC TTTCGTATGT TCTGGCTGAG 
AAGCTGGCGC AACGCATCTT AAAAGGTGAA TATGAACCCG GCACCATTTT GCCTAGTGAG 
ATTGAGCTGG GCGAGCAATT TGGAGTGAGT CGTACAGCGG TACGCGAAGC GGTCAAAACG 
TTAACGGCAA AAGGGATGGT TTTACCGCGA CCGCGAATTG GTACCCGGGT CATGCCACAA 
TCAAACTGGA ATTTTCTTGA TCAGGAATTG CTTACCTGGT GGATGACAGA AGAGAACTTT 
CATCAGGTCA TCGATCACTT TCTGGTTATG CGTATCTGTC TGGAGCCGCA AGCCTGCCTA 
CTGGCAGCAA CGGTTGGCAC CGCGGAACAG AAGGCGCATC TCAATACGTT AATGGCCGAA 
ATGGCGGCAT TAAAAAAGAA CTTTCGCCGT GAACGCTGGA TCGAAGTCGA TATGGCCTGG 
CATGAGCATA TCTATGAAAT GAGCGCCAAT CCGTTTTTGA CCTCATTCGC CTCGCTATTC 
CATTCGGTTT ATCACACTTA CTTCACGTCA ATTACCAGCG ACACAGTGAT AAAGCTGGAT 
CTGCACCAGG CGATTGTCGA TGCGATTATC CAAAGCGATG GCGACGCGGC ATTTAAAGCT 
TGTCAGGCGC TGCTACGCTC ACCTGATAAG TGA
 
Protein sequence
MPLSAQQLAA QKNLSYVLAE KLAQRILKGE YEPGTILPSE IELGEQFGVS RTAVREAVKT 
LTAKGMVLPR PRIGTRVMPQ SNWNFLDQEL LTWWMTEENF HQVIDHFLVM RICLEPQACL 
LAATVGTAEQ KAHLNTLMAE MAALKKNFRR ERWIEVDMAW HEHIYEMSAN PFLTSFASLF 
HSVYHTYFTS ITSDTVIKLD LHQAIVDAII QSDGDAAFKA CQALLRSPDK