Gene SbBS512_E4150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4150 
SymbolilvE 
ID6273113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp3875506 
End bp3876435 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content55% 
IMG OID641727977 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_001882404 
Protein GI187732296 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACGA AGAAAGCTGA TTACATTTGG TTCAATGGGG AGATGGTTCG CTGGGAAGAC 
GCGAAGGTGC ATGTGATGTC GCACGCGCTG CACTATGGCA CTTCGGTTTT TGAAGGCATC 
CGTTGCTACG ACTCGCACAA AGGACCGGTT GTATTCCGCC ATCGTGAGCA TATGCAGCGT 
CTGCATGACT CCGCCAAAAT CTATCGCTTC CCGGTTTCGC AGAGCATTGA TGAGCTGATG 
GAAGCTTGTC GTGACGTGAT CCGCAAAAAT AATCTCACCA GCGCCTATAT CCGTCCGCTG 
ATCTTCGTCG GTGATGTTGG CATGGGAGTA AACCCGCCAG CGGGATACTC AACCGACGTG 
ATTATCGCTG CTTTCCCGTG GGGAGCGTAT TTGGGCGCAG AAGCGCTGGA GCAGGGGATC 
GATGCGATGG TTTCCTCCTG GAACCGCGCA GCACCAAACA CCATCCCGAC GGCGGCAAAA 
GCCGGTGGTA ACTACCTCTC TTCCCTGCTG GTGGGTAGCG AAGCGCGCCG CCACGGTTAT 
CAGGAAGGTA TCGCGCTGGA TGTGAACGGT TACATCTCTG AAGGCGCAGG TGAAAACCTG 
TTTGAAGTGA AAGACGGCGT GCTGTTCACC CCACCGTTTA CCTCATCCGC GCTGCCGGGT 
ATTACCCGTG ATGCCATCAT CAAACTGGCG AAAGAGCTGG GAATTGAAGT GCGTGAGCAG 
GTGCTGTCGC GCGAATCCCT GTACCTGGCG GATGAAGTGT TTATGTCCGG TACTGCGGCA 
GAAATCACGC CAGTGCGCAG CGTAGACGGT ATTCAGGTTG GCGAAGGCCG TTGTGGCCCG 
GTTACCAAAC GCATTCAGCA AGCCTTCTTC GGCCTCTTCA CTGGCGAAAC CGAAGATAAA 
TGGGGCTGGT TAGATCAAGT TAATCAATAA
 
Protein sequence
MTTKKADYIW FNGEMVRWED AKVHVMSHAL HYGTSVFEGI RCYDSHKGPV VFRHREHMQR 
LHDSAKIYRF PVSQSIDELM EACRDVIRKN NLTSAYIRPL IFVGDVGMGV NPPAGYSTDV 
IIAAFPWGAY LGAEALEQGI DAMVSSWNRA APNTIPTAAK AGGNYLSSLL VGSEARRHGY 
QEGIALDVNG YISEGAGENL FEVKDGVLFT PPFTSSALPG ITRDAIIKLA KELGIEVREQ 
VLSRESLYLA DEVFMSGTAA EITPVRSVDG IQVGEGRCGP VTKRIQQAFF GLFTGETEDK 
WGWLDQVNQ