Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4142 |
Symbol | gppA |
ID | 6272438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 3863444 |
End bp | 3864928 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641727969 |
Product | guanosine pentaphosphate phosphohydrolase |
Protein accession | YP_001882396 |
Protein GI | 187733835 |
COG category | [F] Nucleotide transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0248] Exopolyphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTCCA CCTCGTCGCT GTATGCAGCC ATTGATCTCG GTTCGAATAG TTTTCATATG CTGGTTGTGC GCGAGGTGGC TGGAAGCATC CAGACGCTGA CGCGAATAAA ACGCAAAGTG CGTCTGGCTG CTGGCCTGAA TAGCGAAAAT GCCCTGTCTA ATGAAGCAAT GGAGCGCGGT TGGCAATGTC TGCGCCTGTT TGCTGAACGT CTGCAAGATA TCCCTCCCTC GCAAATTCGC GTTGTCGCTA CGGCGACATT ACGTCTTGCC GTCAATGCGG GTGATTTTAT TGCCAAAGCG CAGGAAATCC TCGGTTGTCC GGTACAGGTG ATCAGCGGTG AAGAGGAAGC ACGTCTGATT TATCAGGGCG TTGCTCACAC AACTGGCGGT GCCGATCAGC GCCTGGTGGT GGATATAGGC GGTGCCAGTA CTGAACTGGT AACCGGCACG GGTGCACAAA CCACCTCGTT GTTCAGCCTG TCGATGGGCT GCGTCACCTG GCTGGAACGC TATTTTGCCG ATCGTAATCT GGGGCAGGAA AATTTTGATG CTGCAGAAAA AGCGGCACGC GAAGTGTTAC GTCCGGTTGC CGATGAATTA CGGTATCACG GCTGGAAAGT GTGCGTTGGT GCTTCCGGCA CCGTGCAGGC GTTACAGGAA ATCATGATGG CACAGGGGAT GGATGAACGC ATTACCCTGG AAAAGTTGCA GCAATTGAAA CAGCGAGCCA TTCATTGCGG TCGGCTGGAG GAACTGGAGA TTGACGGGCT GACGCTGGAA CGTGCGTTAG TGTTCCCGAG TGGTCTGGCG ATCCTGATCG CCATTTTTAC CGAACTGAAT ATTCAGTGTA TGACCCTGGC GGGCGGTGCG CTGCGTGAAG GCCTGGTCTA CGGCATGTTG CATCTGGCCG TCGAGCAGGA TATTCGCAGC CGTACGCTGC GTAATATTCA GCGCCGCTTT ATGATCGATA TTGATCAGGC GCAGCGCGTA GCCAAAGTTG CGGCTAACTT CTTCGATCAG GTGGAAAAGG AATGGCATCT TGAAGCAATA AGCCGCGATT TGCTCATCAG CGCCTGTCAG CTTCATGAAA TCGGCCTGAG CGTTGACTTT AAACAAGCGC CGCAACACGC TGCTTATCTG GTGCGTAATC TGGATCTTCC CGGTTTTACC CCCGCACAGA AAAAATTGCT GGCGACGCTA CTGCTCAACC AGACTAATCC GGTCGATCTC TCATCGCTGC ATCAGCAAAA TGCCGTACCG CCGCGCGTCG CAGAACAACT CTGCCGTTTA CTCCGCCTGG CCATCATTTT TGCCAGCCGT CGCCGTGACG ATCTCGTGCC AGAGATGACA TTACAGGCTA ACCATGAACT GTTGACCTTG ACGCTTCCGC AAGGTTGGCT AACCCAACAT CCGCTGGGTA AAGAGATTAT TGCTCAGGAA AGCCAGTGGC AGAGCTATGT CCACTGGCCG CTGGAAGTGC ATTAA
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Protein sequence | MGSTSSLYAA IDLGSNSFHM LVVREVAGSI QTLTRIKRKV RLAAGLNSEN ALSNEAMERG WQCLRLFAER LQDIPPSQIR VVATATLRLA VNAGDFIAKA QEILGCPVQV ISGEEEARLI YQGVAHTTGG ADQRLVVDIG GASTELVTGT GAQTTSLFSL SMGCVTWLER YFADRNLGQE NFDAAEKAAR EVLRPVADEL RYHGWKVCVG ASGTVQALQE IMMAQGMDER ITLEKLQQLK QRAIHCGRLE ELEIDGLTLE RALVFPSGLA ILIAIFTELN IQCMTLAGGA LREGLVYGML HLAVEQDIRS RTLRNIQRRF MIDIDQAQRV AKVAANFFDQ VEKEWHLEAI SRDLLISACQ LHEIGLSVDF KQAPQHAAYL VRNLDLPGFT PAQKKLLATL LLNQTNPVDL SSLHQQNAVP PRVAEQLCRL LRLAIIFASR RRDDLVPEMT LQANHELLTL TLPQGWLTQH PLGKEIIAQE SQWQSYVHWP LEVH
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