| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4114 |
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| Symbol | setC |
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| ID | 6270772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3839107 |
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| End bp | 3840141 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641727943 |
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| Product | sugar efflux transporter C |
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| Protein accession | YP_001882374 |
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| Protein GI | 187731533 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00899] sugar efflux transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.741083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGGTT TTTTCTTCAC CGGTAGCGCT ATTATGGGAA TTCTGGTCAG TCAATTTCTG
GCAAGGCACT CCGATAAACA AGGCGACCGT AAATTACTGA TTCTGCTATG TTGCTTATTT
GGAGTGCTGG CCTGCACGCT TTTTGCGTGG AATCGCAACT ACTTCATTCT CCTCTCTACG
GGCGTACTTC TGAGTAGTTT TGCTTCTACC GCAAACCCGC AAATGTTCGC CCTCGCCCGT
GAACACGCCG ACAGAACAGG CCGTGAGACG GTCATGTTCA GTACATTTTT ACGTGCTCAG
ATCTCGCTTG CCTGGGTTAT CGGGCCACCG CTCGCTTATG AACTGACAAT AAGGTTTAGT
TTTAAAGTGA TGTATCTCAC CGCTGCCATC GCATTTGTTG TTTGCGGGCT GATAGTCTGG
TTGTTTTTGC CATCAATACA AAGAAATATT CCTGTCGTTA CCCAACCCGT AGAAATTTTA
CCCTCCACCC ATAGGAAGCG GGATACGCGG CTACTTTTTG TGGTCTGTTC AATGATGTGG
GCGGCGAATA ATCTCTACAT GATAAATATG CCGCTATTTA TTATTGATGA ACTGCATCTA
ACCGATAAAC TGGCTGGAGA AATGATTGGT ATCGCTGCCG GTCTGGAAAT TCCGATGATG
TTAATCGCAG GCTATTACAT GAAACGTATT GGCAAGCGAC TATTAATGCT CATTGCTATC
GTGAGTGGTA TGTGTTTTTA CGCCAGCGTA CTCATGGCGA CGACTCCGGC GGTTGAGCTG
GAATTGCAAA TTCTAAATGC CATCTTCCTT GGTATTCTCT GTGGTATCGG CATGCTTTAT
TTTCAGGACT TGATGCCTGA AAAAATAGGC TCTGCGACAA CGTTATATGC AAATACTTCA
CGCGTCGGCT GGATTATCGC CGGCTCTGTT GACGGAATTA TGGTTGAAAT CTGGAGCTAC
CATGCGTTGT TCTGGCTGGC GATAGGGATG TTGGGTATTG CGATGATTTG CCTGCTGTTT
ATTAAAGATA TTTAG
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| Protein sequence | MVGFFFTGSA IMGILVSQFL ARHSDKQGDR KLLILLCCLF GVLACTLFAW NRNYFILLST
GVLLSSFAST ANPQMFALAR EHADRTGRET VMFSTFLRAQ ISLAWVIGPP LAYELTIRFS
FKVMYLTAAI AFVVCGLIVW LFLPSIQRNI PVVTQPVEIL PSTHRKRDTR LLFVVCSMMW
AANNLYMINM PLFIIDELHL TDKLAGEMIG IAAGLEIPMM LIAGYYMKRI GKRLLMLIAI
VSGMCFYASV LMATTPAVEL ELQILNAIFL GILCGIGMLY FQDLMPEKIG SATTLYANTS
RVGWIIAGSV DGIMVEIWSY HALFWLAIGM LGIAMICLLF IKDI
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