| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4054 |
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| Symbol | rfaI |
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| ID | 6270461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 3786948 |
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| End bp | 3787964 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641727894 |
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| Product | lipopolysaccharide 1,3-galactosyltransferase |
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| Protein accession | YP_001882326 |
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| Protein GI | 187732682 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCCC ACTATTTTAA TCCACAAGAG ATGATCAATA AGACAATCAT CTTCGATGAA
AGGCCAGCGG CGTCAGTAGC ATCATCATTC CATGTTGCTT ATGGCATTGA TAAAAACTTT
CTTTTTGGTT GTGGTGTTTC AATCACGTCA GTTTTGTTAC ATAACAACGA CGTGAGTTTT
GTTTTCCACG TTTTTATTGA TGATATCCCT GAAGCCGATA TCCAGCGTTT AGCCCAATTG
GCGAAAAGCT ATCGTACCTG TATCCAGATC CATCTAGTAA ATTGTGAACG GCTTAAGGCA
TTACCGACGA CCAAAAATTG GTCTATTGCC ATGTATTTCC GTTTTGTAAT TGCAGATTAC
TTTATTGATC AACAAGATAA GATCTTTTAC CTGGATGCTG ATATCGCCTG TCAGGGAAAC
TTAAAGCCGC TGATAACAAT GGATCTTGCC AATAACGTTG CTGCTGTTGT TACTGAACGC
GATGCTAACT GGTGGTCGTT ACGGGGTCAA AGTCTGCAGT GTAATGAACT TGAAAAGGGC
TACTTTAATT CAGGTGTCCT GTTAATTAAT ACGCTAGCGT GGGCGCAGGA GTCCGTTTCT
GCTAAAGCGA TGTCGATGCT TGCTGATAAA GCCATCGTTT CCCGTTTCAC CTATATGGAT
CAAGATATCC TTAATCTTAT CCTGTTAGGG AAAGTTAAAT TCATTGATGC TAAATACAAT
ACGCAATTTA GTTTAAATTA TGAATTAAAA AAATCATTTG TTTGTCCAAT TAATGATGAA
ACCGTATTAA TTCATTATGT CGGCCCGACA AAACCCTGGC ATTACTGGGC CGGTTATCCA
AGTGCGCAAC CTTTTATCAA AGCCAAAGAA GCATCGCCCT GGAAAAATGA ACCGTTAATG
CGGCCAGTTA ACTCAAACTA TGCTCGTTAT TGCGCCAAGC ATAATTTTAA ACAAAATAAA
CCAATTAACG GGATAATGAA TTATATTTAT TATTTTTATT TAAAGATAAT AAAATGA
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| Protein sequence | MSAHYFNPQE MINKTIIFDE RPAASVASSF HVAYGIDKNF LFGCGVSITS VLLHNNDVSF
VFHVFIDDIP EADIQRLAQL AKSYRTCIQI HLVNCERLKA LPTTKNWSIA MYFRFVIADY
FIDQQDKIFY LDADIACQGN LKPLITMDLA NNVAAVVTER DANWWSLRGQ SLQCNELEKG
YFNSGVLLIN TLAWAQESVS AKAMSMLADK AIVSRFTYMD QDILNLILLG KVKFIDAKYN
TQFSLNYELK KSFVCPINDE TVLIHYVGPT KPWHYWAGYP SAQPFIKAKE ASPWKNEPLM
RPVNSNYARY CAKHNFKQNK PINGIMNYIY YFYLKIIK
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