| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4047 |
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| Symbol | rfaF |
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| ID | 6272930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3779716 |
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| End bp | 3780762 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641727887 |
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| Product | ADP-heptose:LPS heptosyltransferase II |
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| Protein accession | YP_001882319 |
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| Protein GI | 187733078 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000000910947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAC TGGTGATCGG CCCGTCTTGG GTTGGCGACA TGATGATGTC GCAAAGTCTC
TATCGCACGC TCCAGGCGCG CTATCCCCAG GCGATAATCG ATGTGATGGC ACCGGCATGG
TGCCGTCCAT TATTATCGCG GATGCCGGAA GTTAACGAAG CTATCCCTAT GCCTCTCGGT
CACGGAGCGC TGGAAATCGG CGAACGCCGC AAACTGGGTC ATAGCCTGCG TGAAAAGCGC
TACGACCGCG CCTACGTCTT ACCCAACTCC TTCAAATCTG CATTAGTGCC TTTCTTCGCG
GGTATTCCTC ATCGCACCGG CTGGCGCGGC GAGATGCGCT ACGGTTTACT CAACGATGTA
CGCGTGCTCG ATAAAGAAGC CTGGCCGCTA ATGGTGGAAC GCTATGTCGC GCTGGCCTAT
GACAAAGGCA TTATGCGTAC CGCACAAGAT CTGCCGCAGC CATTGTTATG GCCGCAGTTG
CAGGTGAGCG AAGGTGAAAA ATCATATACC TGTAATCAAT TTTCGCTTTC ATCAGAACGT
CCGATGATTG GCTTTTGCCC GGGTGCGGAG TTTGGTCCGG CAAAACGCTG GCCACACTAC
CACTATGCGG AACTGGCAAA GCAGCTGATT GATGAAGGTT ATCAGGTGGT TCTGTTTGGC
TCTGCGAAAG ATCATGAAGC GGGCAATGAG ATTCTTGCCG CTTTGAATAC CGAGCAGCAG
GCATGGTGTC GGAACCTGGC GGGGGAAACA CAGCTTGATC AAGCGGTTAT CCTGATTGCA
GCCTGTAAAG CCATTGTCAC TAACGATTCT GGCCTGATGC ACGTTGCGGC GGCGCTCAAT
CGTCCGCTGG TTGCCCTGTA TGGTCCAAGT AGCCCGGACT TCACACCGCC GCTATCCCAT
AAAGCGCGCG TGATCCGTCT GATTACCGGC TATCACAAAG TGCGTAAAGG TGACGCTGCG
GAGGGTTATC ACCAGAGCTT GATCGACATT ACTCCCCAGC GCGTACTGGA AGAACTCAAC
ACGCTATTGT TACAAGAGGA AGCCTGA
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| Protein sequence | MKILVIGPSW VGDMMMSQSL YRTLQARYPQ AIIDVMAPAW CRPLLSRMPE VNEAIPMPLG
HGALEIGERR KLGHSLREKR YDRAYVLPNS FKSALVPFFA GIPHRTGWRG EMRYGLLNDV
RVLDKEAWPL MVERYVALAY DKGIMRTAQD LPQPLLWPQL QVSEGEKSYT CNQFSLSSER
PMIGFCPGAE FGPAKRWPHY HYAELAKQLI DEGYQVVLFG SAKDHEAGNE ILAALNTEQQ
AWCRNLAGET QLDQAVILIA ACKAIVTNDS GLMHVAAALN RPLVALYGPS SPDFTPPLSH
KARVIRLITG YHKVRKGDAA EGYHQSLIDI TPQRVLEELN TLLLQEEA
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