Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4014 |
Symbol | |
ID | 6272534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 3746707 |
End bp | 3747843 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641727857 |
Product | auxiliary transport protein, membrane fusion protein family |
Protein accession | YP_001882289 |
Protein GI | 187731943 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTAT TGATTGTTTT AACTTACGTG GCGCTGGCGT GGGCGGTCTT TAAAATCTTC CGCATTCCGG TAAATCAGTG GACGCTGGCG ACGGCGGCGC TGGGAGGCGT GTTTCTGGTG AGTGGTTTGA TTTTGTTGAT GAACTACAAC CACCCTTACA CTTTTACCGC GCAAAAGGCA GTGATAGCGA TCCCTATCAC GCCACAGGTG ACGGGAATTG TTACTGAAGT CACTGACAAG AATAATCAGC TTATTCAAAA GGGCGAGGTG CTTTTTAAGC TCGACCCGGT TCGTTACCAG GCGCGAGTTG ACAGACTTCA GGCTGACCTG ATGACGGCGA CGCATAATAT AAAGACGCTG CGTGCGCAGC TCACTGAAGC GCAGGCCAAC ACCACCCAGG TTTCAGCGGA GCGCGACCGT CTGTTTAAAA ATTATCAACG TTACTTGAAA GGCAGCCAGG CGGCGGTGAA TCCGTTCTCG GAACGTGACA TCGACGATGC GCGGCAAAAT TTCCTCGCGC AGGATGCGCT GGTGAAAGGC TCGGTGGCGG AGCAGGCGCA GATCCAGAGC CAGCTCGACA GTATGGTTAA CGGCGAGCAA TCGCAGATTG TGAGCTTAAG AGCGCAACTT ACTGAAGCAA AATATAACCT TGAGCAGACT GTCATTCGCG CGCCGAGCAA TGGCTACGTT ACTCAGGTAC TGATCCGCCC AGGTACATAC GCAGCTGCCT TGCCGCTGCG TCCGGTGATG GTCTTCATCC CCGAGCAAAA ACGGCAAATT GTCGCCCAAT TTCGGCAAAA CTCGCTGTTA CGTCTGAAAC CCGGCGATGA TGCGGAAGTG GTGTTTAACG CGCTACCTAG GCAGGTGTTT CACGGCAAAC TGACTAGTAT TTTACCTGTC GTGCCAGGCG GTTCTTATCA GGCGCAGGGG GGATTGCAAT CATTAACGGT CGTGCCCGGC ACGGACGGTG TGCTGGGAAC CATTGAACTG GACCCTAACG ATGATATCGA TGCCTTACTC GACGGCATCT ACGCCCAGGT GGCGGTTTAC TCCGACCATT TCAGCCATGT TTCGGTGATG CGGAAAGTGC TGCTAAGAAT GACCAGCTGG ATGCATTATC TTTATTTGGA TCATTGA
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Protein sequence | MDLLIVLTYV ALAWAVFKIF RIPVNQWTLA TAALGGVFLV SGLILLMNYN HPYTFTAQKA VIAIPITPQV TGIVTEVTDK NNQLIQKGEV LFKLDPVRYQ ARVDRLQADL MTATHNIKTL RAQLTEAQAN TTQVSAERDR LFKNYQRYLK GSQAAVNPFS ERDIDDARQN FLAQDALVKG SVAEQAQIQS QLDSMVNGEQ SQIVSLRAQL TEAKYNLEQT VIRAPSNGYV TQVLIRPGTY AAALPLRPVM VFIPEQKRQI VAQFRQNSLL RLKPGDDAEV VFNALPRQVF HGKLTSILPV VPGGSYQAQG GLQSLTVVPG TDGVLGTIEL DPNDDIDALL DGIYAQVAVY SDHFSHVSVM RKVLLRMTSW MHYLYLDH
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