| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3996 |
|---|
| Symbol | |
|---|
| ID | 6272573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 3726096 |
|---|
| End bp | 3727424 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641727842 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001882274 |
|---|
| Protein GI | 187731127 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03368] cellulose synthase operon protein YhjU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGGGG CCATTTTTGT TTTATTAGTG GCCTGGTTAT TCCTGTCACA ATGGATTCGC
ATTACCGTTT TTGTGGTTGC CATACTGCTA TGGCTGAACG TACTTACCCT GGCGGGACCA
AGTTTCTCCT TGTGGCCAGC CGGACAACCG ACGACCACTG TAACAACGAC GGGTGGTAAC
GCAGCGGCAA CCGTTGCGAC GACGGGTGGC GCACCGGTAG TGGGTGATAT GCCCGCACAA
ACTACACCGC CAACAACGGC GAACCTTAAC GCCTGGCTGA ATAATTTCTA TAACGCGGAG
GCGAAACGTA AATCGACCTT CCCGTCTTCG CTGCCCGCTG ATGCTCAGCC ATTTGAACTA
CTGGTGATTA ACATCTGTTC GCTTTCCTGG TCGGATATAG AAGCCGCCGG GTTGATGTCG
CATCCACTGT GGTCGCATTT CGATATTGAG TTCAAGAACT TTAACTCCGC CACCTCCTAC
AGTGGCCCGG CGGCGATCCG TTTACTGCGC GCCAGCTGCG GGCAGACTTC GCACACTAAT
CTGTATCAAC CGGCAAATAA CGACTGCTAT CTGTTTGATA ACCTTTCGAA ACTGGGCTTT
ACCCAGCACC TGATGATGGG ACATAACGGC CAGTTCGGCG GTTTTTTGAA AGAAGTTCGC
GAAAATGGCG GCATGCAGAC TGAATTGATG GATCAAACAA ATCTGCCGGT TATTTTGCTG
GGCTTTGATG GTTCGCCGGT TTATGACGAT ACCGCCGTGC TTAACCGCTG GCTGGACGTT
ACCGAAAAAG ATAAAAACAG CCGTAGTGCC ACGTTCTACA ACACGCTTCC ACTGCATGAC
GGCAACCATT ATCCGGGGGT CAGCAAAACA GCGGATTACA AAGCGCGGGC GCAGAAATTC
TTTGATGAAC TGGACGCCTT CTTTACTGAA CTGGAGAAAT CGGGTCGTAA AGTGATGGTG
GTCGTGGTGC CGGAACACGG CGGCGCGCTG AAGGGCGACA GAATGCAGGT ATCTGGCCTA
CGTGATATCC CTAGCCCGTC TATCACAGAC GTCCCCGTTG GGGTGAAATT CTTCGGCATG
AAGGCACCAC ATCAGGGGGC ACCGATTGTC ATCGACCAAC CGAGCAGCTT CCTGGCTATC
TCCGATCTGG TGGTTCGCGT TCTTGATGGC AAGATTTTCA CCGAAGACAA TGTTGACTGG
AAAAAACTCA CCAGTGGGTT GCCACAAACA GCACCGGTCT CCGAGAACTC AAATGCAGTA
GTTATTCAAT ACCAGGATAA ACCGTACGTT CGCCTGAACG GCGGCGACTG GGTGCCTTAC
CCGCAGTAA
|
|---|
| Protein sequence | MIGAIFVLLV AWLFLSQWIR ITVFVVAILL WLNVLTLAGP SFSLWPAGQP TTTVTTTGGN
AAATVATTGG APVVGDMPAQ TTPPTTANLN AWLNNFYNAE AKRKSTFPSS LPADAQPFEL
LVINICSLSW SDIEAAGLMS HPLWSHFDIE FKNFNSATSY SGPAAIRLLR ASCGQTSHTN
LYQPANNDCY LFDNLSKLGF TQHLMMGHNG QFGGFLKEVR ENGGMQTELM DQTNLPVILL
GFDGSPVYDD TAVLNRWLDV TEKDKNSRSA TFYNTLPLHD GNHYPGVSKT ADYKARAQKF
FDELDAFFTE LEKSGRKVMV VVVPEHGGAL KGDRMQVSGL RDIPSPSITD VPVGVKFFGM
KAPHQGAPIV IDQPSSFLAI SDLVVRVLDG KIFTEDNVDW KKLTSGLPQT APVSENSNAV
VIQYQDKPYV RLNGGDWVPY PQ
|
|---|
| |