Gene SbBS512_E3990 details

Gene Information

• Locus tag: SbBS512_E3990
• Symbol: dppD
• ID: 6270933
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 3720805
• End bp: 3721788
• Gene Length: 984 bp
• Protein Length: 327 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 641727836
• Product: dipeptide transporter ATP-binding subunit
• Protein accession: YP_001882268
• Protein GI: 187733844
• COG category: [E] Amino acid transport and metabolism; [P] Inorganic ion transport and metabolism
• COG ID: [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
• TIGRFAM ID: [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 47
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGTTAT TAAATGTAGA TAAATTATCG GTGCATTTCG GCGACGAAAG CGCACCGTTC 
CGCGCCGTAG ACCGCATCAG CTACAGCGTA AAACAGGGCG AAGTGGTTGG GATTGTGGGT 
GAGTCCGGCT CCGGTAAGTC GGTCAGTTCC CTGGCGATTA TGGGGCTGAT TGATTATCCG 
GGCCGCGTAA TGGCGGAAAA ACTGGTGTTT AACGGTCAGG ATTTGCAGCG TATATCAGAA 
AAAGAGCGCC GCAACCTGGT GGGTGCCGAA GTGGCGATGA TCTTCCAGGA CCCGATGACC 
AGCCTTAACC CGTGCTACAC CGTGGGTTTC CAGATCATGG AAGCGATTAA GGTGCATCAG 
GGCGGCAACA AAAGTACCCG CCGTCAGCGG GCGATTGACC TGCTGAATCA GGTCGGTATT 
CCCGATCCGG CTTCGCGTCT GGATGTTTAC CCGCATCAGC TTTCCGGCGG CATGAGCCAG 
CGCGTGATGA TCGCCATGGC GATTGCCTGT CGACCAAAAC TGCTGATTGC CGATGAGCCG 
ACCACCGCGC TGGACGTGAC CATTCAGGCG CAAATCATCG AACTACTGCT GGAGCTACAG 
CAGAAAGAGA ACATGGCGCT GGTGTTGATT ACCCATGACC TGGCGCTGGT GGCGGAAGCT 
GCGCATAAAA TCATTGTGAT GTATGCAGGC CAGGTGGTGG AAACGGGCGA TGCGCACGCC 
ATCTTCCATG CGCCGCGTCA CCCGTATACT CAGGCATTGC TGCGTGCGCT GCCAGAATTT 
GCTCAGGACA AAGAACGTCT GGCGTCGTTG CCAGGTGTCG TTCCCGGCAA GTACGACCGC 
CCGAACGGCT GCCTGCTTAA CCCGCGCTGC CCCTATGCCA CTGACAGATG TCGCGCTGAA 
GAACCGGCGC TGAATATGCT CGCTGACGGG CGTCAGTCCA AATGCCATTA CCCACTTGAT 
GATGCCGGGA GGCCGACACT ATGA 

 

Protein sequence

MVLLNVDKLS VHFGDESAPF RAVDRISYSV KQGEVVGIVG ESGSGKSVSS LAIMGLIDYP 
GRVMAEKLVF NGQDLQRISE KERRNLVGAE VAMIFQDPMT SLNPCYTVGF QIMEAIKVHQ 
GGNKSTRRQR AIDLLNQVGI PDPASRLDVY PHQLSGGMSQ RVMIAMAIAC RPKLLIADEP 
TTALDVTIQA QIIELLLELQ QKENMALVLI THDLALVAEA AHKIIVMYAG QVVETGDAHA 
IFHAPRHPYT QALLRALPEF AQDKERLASL PGVVPGKYDR PNGCLLNPRC PYATDRCRAE 
EPALNMLADG RQSKCHYPLD DAGRPTL